Pairwise Alignments

Query, 278 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

Subject, 250 a.a., predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  137 bits (344), Expect = 3e-37
 Identities = 84/243 (34%), Positives = 144/243 (59%), Gaps = 11/243 (4%)

Query: 1   MAILETRDLKYSYPDGTVALNGINFKAEKGEMIAILGPNGAGKSTTFLHFNGILKPSNGS 60
           M+ +E ++L   +   TV L+GI+ + + GE++AI+GP+G+GK+T     N + +P  G+
Sbjct: 1   MSAIEVKNLVKKFHGQTV-LHGIDLEVKPGEVVAIIGPSGSGKTTLLRSINLLEQPEAGT 59

Query: 61  VILKGEAIKY-----DNKSLLN-VRKTVGIVFQNPDDQLFAP-TVEQDVAFGPMNL-GLS 112
           + +    I         KSL+  +R+ VG VFQN +  LF   TV +++  GP+ + G  
Sbjct: 60  ITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFN--LFPHRTVLENIIEGPVIVKGEP 117

Query: 113 KEEIEKRVKDSLKAVSMEGFERKPPHHLSGGQKKRIAIAGILAMNPEIIVLDEPTSGLDP 172
           KEE   R ++ L  V + G E   P  LSGGQ++R+AIA  LAM PE+I+ DEPTS LDP
Sbjct: 118 KEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDP 177

Query: 173 MGASQIMKLLYELNRQGITIIISTHDVDLVPIYANKVYLLNEGKIIKGGTPREIFSDSET 232
               +++  + +L ++  T++I TH++      A++   +++G+I++ G  + +F+D E 
Sbjct: 178 ELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGAAKALFADPEQ 237

Query: 233 VRS 235
            R+
Sbjct: 238 PRT 240