Pairwise Alignments

Query, 418 a.a., homoaconitase large subunit from Methanococcus maripaludis S2

Subject, 472 a.a., isopropylmalate isomerase from Pseudomonas simiae WCS417

 Score =  204 bits (519), Expect = 5e-57
 Identities = 139/464 (29%), Positives = 223/464 (48%), Gaps = 66/464 (14%)

Query: 13  GKNVYAK--DSVEIS----------VDIAMTHDGTTPLTVKAFEQISDKVWDNEKIVIIF 60
           GK +Y K  DS E+           +D  + H+ T+P   +       K W  + I+   
Sbjct: 3   GKTLYDKLWDSHEVKRRDDGSSLIYIDRHIIHEVTSPQAFEGLRLAGRKPWRVDSIIATP 62

Query: 61  DHNIPANTSKAANMQVITREFIKKQ-----------GIKNYYLDG--EGICHQVLPEKGH 107
           DHN+P    +   +  I  +  + Q           GI  + ++   +GI H + PE+G 
Sbjct: 63  DHNVPTTPERKGGIDAIADQVSRLQVQTLDDYCDEYGITEFKMNDVRQGIVHVIGPEQGA 122

Query: 108 VKPNMIIAGADSHTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPETIRVNVTGENE-N 166
             P M +   DSHT THGAFGA A G G +++ +V+AT     +  + + V V G     
Sbjct: 123 TLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVFATQCLVAKKMKNMLVKVEGTLPFG 182

Query: 167 ISGKDIILKTCKEVGRRGATYMSLEYGGNAVHNLSMDERMVLSNMAIEMGGKAGIIEADD 226
           ++ KDI+L    ++G  G    ++E+ G+A+ +LS++ RM + NM+IE G + G++ AD+
Sbjct: 183 VTAKDIVLAVIGKIGTAGGNGHAIEFAGSAIRDLSIEGRMTICNMSIEAGARVGMVAADE 242

Query: 227 TTYRYLEN-----AGVSREEILELKKNKITVDESEEDYYKTIEFDITGMEEQVACPHHPD 281
            T  Y++       G   +  +E  K+   V +++  +   +E D   ++ QV+    P+
Sbjct: 243 KTVEYVKGRPFAPQGADWDAAVEAWKD--LVSDADAVFDTVVELDAAQIKPQVSWGTSPE 300

Query: 282 NVKGVSE-------------------------------VEGTELNQVFIGSCTNGRLNDL 310
            V  V +                               +   +L++VFIGSCTN R+ DL
Sbjct: 301 MVLAVDQNVPDPAKETDLVKRGSIERALKYMGLQANQAITDIQLDRVFIGSCTNSRIEDL 360

Query: 311 RIAAKYLKGKKVNENTR-LIVIPASKSIFKEALNEGLIDIFVDSGALICTPGCGPCLGAH 369
           R AA   KG+KV    +  IV+P S  +  +A  EGL  IF+++G     PGC  CL  +
Sbjct: 361 RAAAVIAKGRKVASTIKQAIVVPGSGLVKAQAEAEGLDKIFLEAGFEWREPGCSMCLAMN 420

Query: 370 QGVLGDGEVCLATTNRNFKGRMGNTNAQVYLSSPKIAAKSAVKG 413
              L  GE C +T+NRNF+GR G    + +L SP +AA +AV G
Sbjct: 421 PDRLESGEHCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAVNG 463