Pairwise Alignments

Query, 418 a.a., homoaconitase large subunit from Methanococcus maripaludis S2

Subject, 473 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score =  189 bits (479), Expect = 2e-52
 Identities = 141/471 (29%), Positives = 228/471 (48%), Gaps = 61/471 (12%)

Query: 2   TLAEKIISKNVGKNVYAKD--SVEISVDIAMTHDGTTPLTVKAFEQISDKVWDNEKIVII 59
           TL +KI  ++V   V+ ++  +  + +D  + H+ T+P   +   +   K+W    +V  
Sbjct: 4   TLYDKIWDEHV---VHTEEDGTAILYIDRHLVHEVTSPQAFEGLREAGRKLWRISSVVAT 60

Query: 60  FDHNIPAN---------TSKAANMQVITREF-IKKQGIKNYY---LDGEGICHQVLPEKG 106
            DHN P               +  QV T +  I + G   ++      +GI H + PE G
Sbjct: 61  ADHNTPTTGWERGYEGIADPTSKEQVTTLDHNIAEFGAAAFFPFLSKRQGIVHVIGPESG 120

Query: 107 HVKPNMIIAGADSHTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPETIRVNVTGENE- 165
              P M +   DSHT THGAFGA A G G +++ +V AT     +  + + V V G+   
Sbjct: 121 ATLPGMTVVCGDSHTSTHGAFGALAHGIGTSEVEHVMATQTLLGKKAKNMLVKVDGKLPL 180

Query: 166 NISGKDIILKTCKEVGRRGATYMSLEYGGNAVHNLSMDERMVLSNMAIEMGGKAGIIEAD 225
             + KDI+L    ++G  G T  ++E+ G+A+ +LSM+ RM + NMAIE G +AG++  D
Sbjct: 181 GCTAKDIVLAIIGKIGTAGGTGYTIEFAGSAIRDLSMEGRMTVCNMAIEAGARAGLVAVD 240

Query: 226 DTTYRYLEN-----AGVSREEILELKKNKITVDESEEDYYKTIEFDITGMEEQVACPHHP 280
           + T  Y++       GV  ++ +   +   +   ++ D    +E D   +  QV     P
Sbjct: 241 EKTISYVKGRPLAPTGVEWDQAVSYWRTLQSDPGAKFD--AVVELDAATIPPQVTWGTSP 298

Query: 281 D------------------NVKGVSE-------------VEGTELNQVFIGSCTNGRLND 309
           +                  N +G  E             +    +++VFIGSCTN R+ D
Sbjct: 299 EMVVEINGRVPDPDKEKDANKRGAIERALVYMGLEPNKAMNDIFIDKVFIGSCTNSRIED 358

Query: 310 LRIAAKYLK--GKKVNENTRL-IVIPASKSIFKEALNEGLIDIFVDSGALICTPGCGPCL 366
           +R AA  +K  G+KV +N +L +V+P S  + ++A  EGL  IF  +G     PGC  CL
Sbjct: 359 MREAAAVVKKLGQKVAKNVKLAMVVPGSGVVKEQAEREGLDVIFKAAGFEWREPGCSMCL 418

Query: 367 GAHQGVLGDGEVCLATTNRNFKGRMGNTNAQVYLSSPKIAAKSAVKGYITN 417
             +   L  GE C +T+NRNF+GR G    + +L SP +AA +AV G+  +
Sbjct: 419 AMNADRLEPGERCASTSNRNFEGRQG-AGGRTHLVSPAMAAAAAVHGHFVD 468