Pairwise Alignments

Query, 418 a.a., homoaconitase large subunit from Methanococcus maripaludis S2

Subject, 466 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score =  162 bits (411), Expect = 2e-44
 Identities = 117/375 (31%), Positives = 178/375 (47%), Gaps = 50/375 (13%)

Query: 86  GIKNYYLD--GEGICHQVLPEKGHVKPNMIIAGADSHTCTHGAFGAFATGFGATDMGYVY 143
           G++ Y L   G+GI H + PE G V P + +   DSHTCT+G  GA A G G+++  +  
Sbjct: 94  GVRFYDLGQPGQGIVHVMGPELGIVLPGLTVICGDSHTCTNGGLGALAFGVGSSESTHAL 153

Query: 144 ATGKTWLRVPETIRVNVTGE-NENISGKDIILKTCKEVGRRGATYMSLEYGGNAVHNLSM 202
           AT     + P+ +R+   G     ++ KD+ L    ++G       ++E+ G AV  L +
Sbjct: 154 ATQTLRQQKPKRMRIRCDGALGAGVTAKDLALHIIGKLGAAAGVGYAIEFAGEAVRALDV 213

Query: 203 DERMVLSNMAIEMGGKAGIIEADDTTYRYL-------------------------ENAGV 237
           + R+ L N+ +E+G + G+I  D  T  ++                         E+A  
Sbjct: 214 EARLTLCNLTVELGARFGLIAPDRRTVEWVRGRNFAPTGEAFDAAAAHWLLLASDEDAVF 273

Query: 238 SREEILELKK--NKITVDESEEDYYKTIEFDITGMEEQVACPHHPDNVKGVSE------- 288
            REE +        IT   S ED    I  D T  +   A     D  +G  E       
Sbjct: 274 DREETINAGTIAPTITWGTSPED---AIAIDGTVPDPSTAAD---DATRGAIEAALDYMG 327

Query: 289 ------VEGTELNQVFIGSCTNGRLNDLRIAAKYLKGKKVNENTRLIVIPASKSIFKEAL 342
                 + GT ++ VFIGSC N RL DLR AA   +G+ V       V+P S+++ + A 
Sbjct: 328 LAPRTAIAGTPVDWVFIGSCANSRLPDLRAAAAVARGRHVAHGVTAWVVPGSENVRRAAE 387

Query: 343 NEGLIDIFVDSGALICTPGCGPCLGAHQGVLGDGEVCLATTNRNFKGRMGNTNAQVYLSS 402
            EGL D+F  +G     PGC  C+ A+   +     C++T+NRNF GR G   A+ +L+S
Sbjct: 388 AEGLRDVFEAAGFQWREPGCSMCVAANGEQVPPQARCVSTSNRNFVGRQG-PGARTHLAS 446

Query: 403 PKIAAKSAVKGYITN 417
           P +AA +AV G IT+
Sbjct: 447 PAMAAAAAVTGRITD 461