Pairwise Alignments

Query, 418 a.a., homoaconitase large subunit from Methanococcus maripaludis S2

Subject, 424 a.a., 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) from Variovorax sp. SCN45

 Score =  297 bits (760), Expect = 5e-85
 Identities = 163/419 (38%), Positives = 248/419 (59%), Gaps = 12/419 (2%)

Query: 2   TLAEKIISKNVGKN-VYAKDSVEISVDIAMTHDGTTPLTVKAF-EQISDKVWDNEKIVII 59
           TLA+K+I++  G++ V   + V   VD+AM HD + P  +K   E++  ++WD  +IV++
Sbjct: 9   TLAQKLIARASGRDHVAVGEIVTCDVDLAMFHDSSGPRRLKPMLEELGAQIWDRSRIVLV 68

Query: 60  FDHNIPANTSKAANMQVITREFIKKQGIKNYYLDGEGICHQVLPEKGHVKPNMIIAGADS 119
            DH +P     +  +  I R++ + Q + + Y D +GICH V+P+ GH++P M+  G DS
Sbjct: 69  MDHYVPERDDDSRRIVRIARDWARDQQLPHVY-DSQGICHVVVPQHGHIRPGMLCVGGDS 127

Query: 120 HTCTHGAFGAFATGFGATDMGYVYATGKTWLRVPETIRVNVTGE-NENISGKDIILKTCK 178
           H+ T GAFGA+  G G+T+M  V  TG+ WLRVPET+++   G+ +  ++ KD++L    
Sbjct: 128 HSPTGGAFGAYMFGVGSTEMLGVLVTGQIWLRVPETLQMWWDGKLSAGVTAKDMMLHMIG 187

Query: 179 EVGRRGATYMSLEYGGNAVHNLSMDERMVLSNMAIEMGGKAGIIEADDTTYRYLENAGVS 238
             G  G  Y ++E+ G AV  LSM ERM LSNM+ E+G +AG+I  D TT  +L  AG  
Sbjct: 188 RFGMNGGRYQAVEFAGPAVMALSMQERMTLSNMSAELGAQAGLIAPDATTAAFLAQAGAP 247

Query: 239 REEILELKKNKITVDESEEDYYKTIEFDITGMEEQVACPHHPDNVKGVSEVEGTELNQVF 298
             ++          DE  +       FD + +E  +A PH P N  GVS    T ++  +
Sbjct: 248 PVDMTPW-----FTDEGAD--LTRHRFDASALEPHIAAPHSPANSHGVSRYADTPVDVAY 300

Query: 299 IGSCTNGRLNDLRIAAKYLKGKKVNENTRLIVIPASKSIFKEALNEGLIDIFVDSGALIC 358
           IG+CT  +L+DLR AA+ L+G KV    RLIV PAS    ++A  EG++ + +D+GA + 
Sbjct: 301 IGACTGAKLDDLRAAAQVLRGHKVAAGIRLIVAPASIQDQEQAREEGVLQVLMDAGAELF 360

Query: 359 TPGCGPCLGAHQGVLGDGEVCLATTNRNFKGRMGNTNAQVYLSSPKIAAKSAVKGYITN 417
              CG C G +   +GD    ++TT RNFKGRMG+  AQVYL SP   A +A++G +T+
Sbjct: 361 PTACGACSG-YGDPMGDDVTVISTTARNFKGRMGSPTAQVYLGSPYTVAAAALRGRVTD 418