Pairwise Alignments

Query, 418 a.a., homoaconitase large subunit from Methanococcus maripaludis S2

Subject, 469 a.a., 3-isopropylmalate dehydratase, large subunit from Agrobacterium fabrum C58

 Score =  211 bits (536), Expect = 5e-59
 Identities = 139/439 (31%), Positives = 217/439 (49%), Gaps = 50/439 (11%)

Query: 26  VDIAMTHDGTTPLTVKAFEQISDKVWDNEKIVIIFDHNIPANTSKA-------ANMQVIT 78
           +D  + H+ T+P   +        V    + + + DHN+P    +        + +QV  
Sbjct: 29  IDRHLVHEVTSPQAFEGLRIAGRPVHSPTRTLAVVDHNVPTTADRLEGIKNEESRIQVEA 88

Query: 79  REFIKKQGIKNYYLDGE---GICHQVLPEKGHVKPNMIIAGADSHTCTHGAFGAFATGFG 135
                K+    YY + +   GI H V PE+G   P M I   DSHT THGAFGA A G G
Sbjct: 89  LAQNAKEFGVEYYSERDKRQGIVHIVGPEQGFTLPGMTIVCGDSHTSTHGAFGALAHGIG 148

Query: 136 ATDMGYVYATGKTWLRVPETIRVNVTGE-NENISGKDIILKTCKEVGRRGATYMSLEYGG 194
            +++ +V AT     +  + + V V G+  E+++ KDIIL    E+G  G T   +E+ G
Sbjct: 149 TSEVEHVLATQTLIQKKAKNMLVRVDGKLPESVTAKDIILAIIGEIGTAGGTGHVIEFAG 208

Query: 195 NAVHNLSMDERMVLSNMAIEMGGKAGIIEADDTTYRYLEN-----AGVSREEILELKKNK 249
            A+ +LSM+ RM + NM IE G +AG+I  D+TT+ Y+++      G + E+ +   K  
Sbjct: 209 EAIRSLSMEGRMTVCNMTIEGGARAGLIAPDETTFDYIKDKPRAPKGETLEQAIAYWKT- 267

Query: 250 ITVDESEEDYYKTIEFDITGMEEQVACPHHPDNVKGV----------------------- 286
           +  DE    Y K +  D   +   V+    P++V  V                       
Sbjct: 268 LKSDEGAH-YDKVVILDAANLPPIVSWGSSPEDVTSVEGIVPNPDDIEEENKRTSKWRAL 326

Query: 287 --------SEVEGTELNQVFIGSCTNGRLNDLRIAAKYLKGKKVNENTRLIVIPASKSIF 338
                   + +    +++VFIGSCTNGR+ DLR AAK + G+KV      +++P S  + 
Sbjct: 327 DYMGLKPGTRITDIAIDRVFIGSCTNGRIEDLRAAAKIVDGRKVASTVSAMIVPGSGLVK 386

Query: 339 KEALNEGLIDIFVDSGALICTPGCGPCLGAHQGVLGDGEVCLATTNRNFKGRMGNTNAQV 398
           ++A  EGL  IF+D+G     PGC  CL  +   L  GE C +T+NRNF+GR G   ++ 
Sbjct: 387 EQAEKEGLDKIFLDAGFEWREPGCSMCLAMNDDRLKPGERCASTSNRNFEGRQG-YKSRT 445

Query: 399 YLSSPKIAAKSAVKGYITN 417
           +L SP +AA +A+ G+  +
Sbjct: 446 HLVSPAMAAAAAIAGHFVD 464