Pairwise Alignments

Query, 1034 a.a., isoleucine--tRNA ligase from Methanococcus maripaludis S2

Subject, 956 a.a., valine--tRNA ligase from Dickeya dianthicola 67-19

 Score =  131 bits (329), Expect = 3e-34
 Identities = 123/534 (23%), Positives = 205/534 (38%), Gaps = 100/534 (18%)

Query: 319 IVPGDHVTLEGGTGLVHTAPGFGEDDFNIGKEHNIPVYAPIDDNGK-------------- 364
           IV  +H  +E GTG V   P    +D+ +GK H +P+   +  +G               
Sbjct: 261 IVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHQLPMINILTFDGDIRQEAEVFSTNGEA 320

Query: 365 ---YTDSI---WKGTFVKDMDESVIETLISKNLLVNSGKVKHTYPHCWRCKTPLLFRATE 418
              Y+D I   ++G       ++V+       LL        T P+  R    +    T+
Sbjct: 321 SAAYSDDIPNAFRGLERFAARKAVVAAFDELGLLEEIKAHDLTVPYGDRGGVVIEPMLTD 380

Query: 419 QWFLS---ISKIKDSIIEQGKTVDWVPDWVKTRYVNGVSFVGDWNISRQRYWGIPLPIWI 475
           QW++    ++K     +E G+ + +VP   +  Y + +  + DW ISRQ +WG  +P W 
Sbjct: 381 QWYVRAGVLAKPAVEAVEDGR-IQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWY 439

Query: 476 CEECGNYEVIGSVDELKERANEKDVDLSDIHKPAVDKITLTCSCGGKMKRTPDVLDVWYD 535
            ++   Y  +G  +    R N    D++                   +++  DVLD W+ 
Sbjct: 440 ADDGKVY--VGRDEAEVRRDNNLGADVA-------------------LRQDEDVLDTWFS 478

Query: 536 SGLAPYASIG-------SKKLKKAQFITEGNDQVTKWFYSQHALSAVVFDDTS------Y 582
           SGL  ++++G        K    +  +  G D +  W      L+     D        +
Sbjct: 479 SGLWTFSTLGWPEQTPELKAFHPSSVMVSGFDIIFFWIARMIMLTMHFIKDEDGKPQVPF 538

Query: 583 EKCMMHGFTLDETGEKMSKSLGNIVSPDDVT----------------------------- 613
               M G   DE G+KMSKS GN++ P D+                              
Sbjct: 539 HTVYMTGLIRDEEGQKMSKSKGNVIDPLDMVDGISLDALLEKRTGNMMQPQLAEKIRKRT 598

Query: 614 --------EQYGADVLRFYLLSANKAWEDLRFSYSEMDETRSMLNTLWNSYAFSANYMVL 665
                   E +G D LRF L +      D+ +    ++  R+  N LWN+  F       
Sbjct: 599 EKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTED 658

Query: 666 DD--FVPN--NEYFKHVKDEDAWILSRINTVAKEAVEALEKPHLHVYTWALRDFILNDFS 721
            D  F  N  N   K +   D WIL+  N   K   +AL+     +    L +F  N F 
Sbjct: 659 QDCGFTANGKNGGEKVLSLADRWILAEFNRTVKAYRDALDGYRFDLAANVLYEFTWNQFC 718

Query: 722 RWYIKLIRDRTWMEKNDVQKLSAYQTLYYVIMKLISIMAPVTPHLSEEIYQNLK 775
            WY++L +       +D +      TL  V+  L+ +  P+ P ++E I+Q +K
Sbjct: 719 DWYLELTKP-VMTSGSDAELRGTRHTLVTVLETLLRLAHPIIPFITETIWQRVK 771



 Score = 82.0 bits (201), Expect = 2e-19
 Identities = 57/241 (23%), Positives = 118/241 (48%), Gaps = 11/241 (4%)

Query: 5   KSVNFRELDKKVKEYWKKENTYKKVKALNEHGPEYYFVDGPPYCSGAIHLGTAWNKIIKD 64
           K+ N  ++++ + ++W+K+  +K     ++    +  +  PP  +G++H+G A+ + I D
Sbjct: 3   KTYNPHDIEQPLYDHWEKQGYFKPNGDTSQES--FSIMIPPPNVTGSLHMGHAFQQTIMD 60

Query: 65  TVLRFKRIQGYNVLDKAGWDMHGLPIEVKVENEFNIGSKKDIETKIGTQEFINKCKEFAL 124
           T++R++R+QG N L +AG D  G+  ++ VE +      K      G + FI+K   +  
Sbjct: 61  TMIRYQRMQGKNTLWQAGTDHAGIATQMVVERKIAAEEGK-TRHDYGREAFIDKIWRWKA 119

Query: 125 NHLGHMQGQFENLGVWLDFENAYMPIKRDYMEMGWWTLKKAHEKELLTKDLRSGYWCPRC 184
              G +  Q   LG  +D+E     +             + ++++L+ +  R   W P+ 
Sbjct: 120 ESGGTITRQMRRLGNSVDWERERFTMDDGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKL 179

Query: 185 ETSLAEHEVRGEYKEVLDPSVYVKF------KLEKSDEYITIWTTTPWTLPSNMLVCVNP 238
            T++++ EV  E ++V     ++++      K     +Y+ + TT P T+  +  V VNP
Sbjct: 180 RTAISDLEV--ENRDVKGSMWHLRYPLADGAKTVDGKDYLVVATTRPETVLGDTGVAVNP 237

Query: 239 E 239
           E
Sbjct: 238 E 238