Pairwise Alignments

Query, 213 a.a., CBS domain-containing protein from Methanococcus maripaludis S2

Subject, 382 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 27/135 (20%)

Query: 5   SLMDKKFIKIYPDFTVQTVIDLMYKNKKFSTPIVDNDGKMVGWTTAIDLM---------- 54
           S+M +  I + PD +++    LM+ +   + P+ ++  ++VG  T  D +          
Sbjct: 240 SVMSRDVIGVAPDDSLRHAHALMHNHHFKALPVTNDKAEIVGIVTQTDFLEKASWRNGRP 299

Query: 55  ----------IVSDKNIP---IKDIM-SPIEDVIVVNKNEPAREAVTKIVEYKVISIPVL 100
                     I+S  + P   +KDIM SP++ V+     E   EA+ +  E  +  +PV+
Sbjct: 300 SIGFLQRLRLILSGASAPNDTVKDIMTSPVKTVLPETSIE---EAIIRFAEEGLHYLPVI 356

Query: 101 NDEGRVVGIVRNCDI 115
           + +G++VGIV   D+
Sbjct: 357 DAKGKMVGIVSQSDV 371



 Score = 29.6 bits (65), Expect = 8e-05
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 72  DVIVVNKNEPAREAVTKIVEYKVISIPVLNDEGRVVGIVRNCDITKTLS 120
           DVI V  ++  R A   +  +   ++PV ND+  +VGIV   D  +  S
Sbjct: 245 DVIGVAPDDSLRHAHALMHNHHFKALPVTNDKAEIVGIVTQTDFLEKAS 293



 Score = 29.6 bits (65), Expect = 8e-05
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 3   VKSLMDKKFIKIYPDFTVQTVIDLMYKNKKFSTPIVDNDGKMVGWTTAIDLMI 55
           VK +M      + P+ +++  I    +      P++D  GKMVG  +  D+M+
Sbjct: 321 VKDIMTSPVKTVLPETSIEEAIIRFAEEGLHYLPVIDAKGKMVGIVSQSDVMV 373