Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., NADH-quinone oxidoreductase subunit I from Xanthobacter sp. DMC5

 Score = 50.1 bits (118), Expect = 3e-11
 Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 11/79 (13%)

Query: 131 EESCIKCGICERFCPTSAITVE---KRNS-------IDINLNLCMGCTACEKVCPKSAIK 180
           EE CI C +CE  CP  AIT+E   +RN         DI++  C+ C  C++ CP  AI 
Sbjct: 59  EERCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGFCQEACPVDAI- 117

Query: 181 VENEMGEITAENEISLNND 199
           VE    E   E    L  D
Sbjct: 118 VEGPNFEFATETREELYYD 136



 Score = 45.4 bits (106), Expect = 7e-10
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 15/73 (20%)

Query: 77  EKCVKCEICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIK 136
           E+C+ C++C   CP  AI +  G             +  D T R  R   +++D   CI 
Sbjct: 60  ERCIACKLCEAICPAQAITIEAGP------------RRNDGTRRTTR---YDIDMVKCIY 104

Query: 137 CGICERFCPTSAI 149
           CG C+  CP  AI
Sbjct: 105 CGFCQEACPVDAI 117



 Score = 45.4 bits (106), Expect = 7e-10
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 11/58 (18%)

Query: 199 DTCINCMVCSEICPVGAIVYEDGLMK-----------LDDKMCIFCGKCEKNCPVTAI 245
           + CI C +C  ICP  AI  E G  +           +D   CI+CG C++ CPV AI
Sbjct: 60  ERCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGFCQEACPVDAI 117



 Score = 43.9 bits (102), Expect = 2e-09
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 164 CMGCTACEKVCPKSAIKVE-----NEMGEITAENEISLNNDTCINCMVCSEICPVGAIV 217
           C+ C  CE +CP  AI +E     N+    T   +I +    CI C  C E CPV AIV
Sbjct: 62  CIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVK--CIYCGFCQEACPVDAIV 118



 Score = 37.4 bits (85), Expect = 2e-07
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 9/57 (15%)

Query: 47  KCIRCELCYEMCPVDAI-------KEPSVKSPA--EILPEKCVKCEICAKTCPVGAI 94
           +CI C+LC  +CP  AI       +    +     +I   KC+ C  C + CPV AI
Sbjct: 61  RCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGFCQEACPVDAI 117



 Score = 32.7 bits (73), Expect = 5e-06
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 43  VESNKCIRCELCYEMCPVDAIKE 65
           ++  KCI C  C E CPVDAI E
Sbjct: 97  IDMVKCIYCGFCQEACPVDAIVE 119



 Score = 26.2 bits (56), Expect = 4e-04
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 227 DKMCIFCGKCEKNCPVTAIAIK 248
           ++ CI C  CE  CP  AI I+
Sbjct: 59  EERCIACKLCEAICPAQAITIE 80