Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 161 a.a., NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) from Sphingobium sp. HT1-2

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 34/103 (33%), Positives = 45/103 (43%), Gaps = 11/103 (10%)

Query: 107 NVVYELKEIDVTHR-KIRLVKHELDEESCIKCGICERFCPTSAITVE---------KRNS 156
           N  YE   I    R +  L ++   EE CI C +CE  CP  AIT+E         +   
Sbjct: 34  NYPYEKNPISPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAQPRDDGSRRTTR 93

Query: 157 IDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNND 199
            DI++  C+ C  C++ CP  AI VE    E   E    L  D
Sbjct: 94  YDIDMTKCIYCGFCQEACPVDAI-VEGPNFEFATETREELIYD 135



 Score = 45.4 bits (106), Expect = 7e-10
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 10/57 (17%)

Query: 199 DTCINCMVCSEICPVGAIVYE-----DGLMK-----LDDKMCIFCGKCEKNCPVTAI 245
           + CI C +C  ICP  AI  E     DG  +     +D   CI+CG C++ CPV AI
Sbjct: 60  ERCIACKLCEAICPAQAITIEAQPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 116



 Score = 44.7 bits (104), Expect = 1e-09
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 16/73 (21%)

Query: 77  EKCVKCEICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIK 136
           E+C+ C++C   CP  AI +    A+  +D                R  ++++D   CI 
Sbjct: 60  ERCIACKLCEAICPAQAITI---EAQPRDDG-------------SRRTTRYDIDMTKCIY 103

Query: 137 CGICERFCPTSAI 149
           CG C+  CP  AI
Sbjct: 104 CGFCQEACPVDAI 116



 Score = 44.3 bits (103), Expect = 2e-09
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 164 CMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDT--CINCMVCSEICPVGAIV 217
           C+ C  CE +CP  AI +E +  +  +      + D   CI C  C E CPV AIV
Sbjct: 62  CIACKLCEAICPAQAITIEAQPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 117



 Score = 38.5 bits (88), Expect = 8e-08
 Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 8/56 (14%)

Query: 47  KCIRCELCYEMCPVDAIK-EPSVKSPA-------EILPEKCVKCEICAKTCPVGAI 94
           +CI C+LC  +CP  AI  E   +          +I   KC+ C  C + CPV AI
Sbjct: 61  RCIACKLCEAICPAQAITIEAQPRDDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 116



 Score = 33.9 bits (76), Expect = 2e-06
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 43  VESNKCIRCELCYEMCPVDAIKE 65
           ++  KCI C  C E CPVDAI E
Sbjct: 96  IDMTKCIYCGFCQEACPVDAIVE 118



 Score = 26.2 bits (56), Expect = 4e-04
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 227 DKMCIFCGKCEKNCPVTAIAIK 248
           ++ CI C  CE  CP  AI I+
Sbjct: 59  EERCIACKLCEAICPAQAITIE 80