Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 481 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score =  104 bits (259), Expect = 4e-27
 Identities = 79/259 (30%), Positives = 115/259 (44%), Gaps = 35/259 (13%)

Query: 3   TVKKPVQKIISDISKNLGIDEKFVKEKLKDLIVPVERNLY----VESNKCIRCELCYEMC 58
           T  K + +  S I K +G   +F + K   ++ P ER L     ++S KC+ C  C  +C
Sbjct: 132 TKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCIYLC 191

Query: 59  PVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAIN--------VLEGRAKLEEDNVVY 110
           P D I E      AE++ + C +C IC + CPV AI         +L G    +    V 
Sbjct: 192 PKDTIIE------AEMV-DGCTRCNICNEVCPVDAIEYGQVTENCILCGNCISKCPKDVL 244

Query: 111 ELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSIDINLNLCMGCTAC 170
           E+ E  V   K   VK +  E+ CI CG+C   CP++A+  E    I  +   C  C  C
Sbjct: 245 EISEFKVVKTK-EDVKAK-PEKHCINCGLCVDKCPSNALRFE-NGKILYDPKTCTLCNTC 301

Query: 171 EKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSEICPVGAIVYED--GLMKLDDK 228
            K CP+    V    GE          +  C+ C +C + CP  AI  ++      +D +
Sbjct: 302 VKECPQG---VRINKGEFV--------DGGCVLCELCIKECPEDAISIKERSKFTSIDKE 350

Query: 229 MCIFCGKCEKNCPVTAIAI 247
            CI CG C   CP  AI +
Sbjct: 351 ECIACGTCSMVCPNDAITV 369



 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 58/244 (23%), Positives = 94/244 (38%), Gaps = 50/244 (20%)

Query: 42  YVESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGA-------- 93
           YV    C  C +C  +CP+D I      +        CV C +C   CP  A        
Sbjct: 69  YVNRKLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECPYNARLYFDPSS 128

Query: 94  INVLEGRAKLEEDNVVYEL----------KEIDVTHRKIRLVKHEL--DEESCIKCGICE 141
           +   + +  +E  + ++++          K + +     R ++H +  D + C++CG C 
Sbjct: 129 LKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECGKCI 188

Query: 142 RFCPTSAITVEKRNSIDINLNLCMGCTACEKVCPKSAI-----------------KVENE 184
             CP   I   +       ++ C  C  C +VCP  AI                 K   +
Sbjct: 189 YLCPKDTIIEAEM------VDGCTRCNICNEVCPVDAIEYGQVTENCILCGNCISKCPKD 242

Query: 185 MGEITAENEISLNNDT-------CINCMVCSEICPVGAIVYEDGLMKLDDKMCIFCGKCE 237
           + EI+    +    D        CINC +C + CP  A+ +E+G +  D K C  C  C 
Sbjct: 243 VLEISEFKVVKTKEDVKAKPEKHCINCGLCVDKCPSNALRFENGKILYDPKTCTLCNTCV 302

Query: 238 KNCP 241
           K CP
Sbjct: 303 KECP 306



 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 67/261 (25%), Positives = 94/261 (36%), Gaps = 77/261 (29%)

Query: 42  YVESNKCIRCEL--CYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAINVLE- 98
           Y E   C   E+  C E+CP +AIK    K+ +      C+ C  CAK CP GAI   E 
Sbjct: 12  YEECEDCKNKEISKCMEVCPTNAIKMIDGKAFS------CITCGTCAKECPTGAIKKNEY 65

Query: 99  -----GRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSA----- 148
                 R       +   +  ID+   +            C+ CG+C   CP +A     
Sbjct: 66  GGYYVNRKLCTGCGICKNVCPIDIIDIREDSTGKSYPTGMCVMCGLCTTECPYNARLYFD 125

Query: 149 ----------ITVEK------------------------------RNSIDINLNLCMGCT 168
                     + +E+                              R+SI I+   C+ C 
Sbjct: 126 PSSLKNTKNKMLMERYSTIFKMMGKTYEFPEPKHVKIVKPAERKLRHSISIDSKKCVECG 185

Query: 169 ACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSEICPVGAIVYEDGLMKLDDK 228
            C  +CPK  I +E EM             D C  C +C+E+CPV AI Y         +
Sbjct: 186 KCIYLCPKDTI-IEAEM------------VDGCTRCNICNEVCPVDAIEYGQ-----VTE 227

Query: 229 MCIFCGKCEKNCPVTAIAIKQ 249
            CI CG C   CP   + I +
Sbjct: 228 NCILCGNCISKCPKDVLEISE 248



 Score = 76.6 bits (187), Expect = 9e-19
 Identities = 54/191 (28%), Positives = 78/191 (40%), Gaps = 38/191 (19%)

Query: 35  VPVERNLYVESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAI 94
           V + +  +V+   C+ CELC + CP DAI          I  E+C+ C  C+  CP  AI
Sbjct: 309 VRINKGEFVDGG-CVLCELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAI 367

Query: 95  NVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAI----- 149
            V+        + V          H K+      +  ++C+ C  C   CP   I     
Sbjct: 368 TVVIDSLNFSGNKV----------HSKV------IFNDNCVICEKCAIHCPRDVIENTSG 411

Query: 150 ---TVEKRNS-IDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCM 205
               V++ NS I  + + C+ C  C  +CP  AI    + GEI        N + C  C 
Sbjct: 412 HKKVVDRENSYIRTDNDYCVKCGLCTIICPNDAI----DKGEI--------NTEKCEYCS 459

Query: 206 VCSEICPVGAI 216
            C  ICP  AI
Sbjct: 460 ACVNICPTRAI 470



 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 41/148 (27%), Positives = 59/148 (39%), Gaps = 19/148 (12%)

Query: 23  EKFVKEKLKDLIVPVERNLY--VESNKCIRCELCYEMCPVDAIK--------EPSVKSPA 72
           E  +KE  +D I   ER+ +  ++  +CI C  C  +CP DAI           +     
Sbjct: 325 ELCIKECPEDAISIKERSKFTSIDKEECIACGTCSMVCPNDAITVVIDSLNFSGNKVHSK 384

Query: 73  EILPEKCVKCEICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHR---------KIR 123
            I  + CV CE CA  CP   I    G  K+ +    Y   + D   +            
Sbjct: 385 VIFNDNCVICEKCAIHCPRDVIENTSGHKKVVDRENSYIRTDNDYCVKCGLCTIICPNDA 444

Query: 124 LVKHELDEESCIKCGICERFCPTSAITV 151
           + K E++ E C  C  C   CPT AI +
Sbjct: 445 IDKGEINTEKCEYCSACVNICPTRAIRI 472