Pairwise Alignments
Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Subject, 397 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2
Score = 97.4 bits (241), Expect = 4e-25
Identities = 68/242 (28%), Positives = 104/242 (42%), Gaps = 70/242 (28%)
Query: 40 NLYVESNK----CIRCELCYEMCPVDAIKEPSVKSPAE----------ILPEKCVKCEIC 85
NL +E++K C+ C C + CP + V PA+ + E CV C +C
Sbjct: 82 NLKIENDKLKGFCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVC 141
Query: 86 AKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCP 145
CPVGA+++ EG K +D++SCI C IC + CP
Sbjct: 142 ISECPVGALSI-EGE-------------------------KAVVDKDSCIYCSICAQTCP 175
Query: 146 TSAITVEKRNS---------IDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISL 196
+AI V + S ++ +LC+GC C CP+ I V NEM +++
Sbjct: 176 WNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLI-VLNEM--------VAV 226
Query: 197 NNDTCINCMVCSEICPVGAI-----------VYEDGLMKLDDKMCIFCGKCEKNCPVTAI 245
C C +C CPV AI + ++G++ D++ C +CG C CP AI
Sbjct: 227 PPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIV-WDEEKCAYCGPCAIKCPNNAI 285
Query: 246 AI 247
+
Sbjct: 286 TV 287
Score = 91.3 bits (225), Expect = 3e-23
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 35/212 (16%)
Query: 43 VESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAINVLEGRAK 102
+ + C C+ C CP +A+K +P ++ C C C CP A+N
Sbjct: 4 INTEDCYMCKACENSCPTEALK----LNPFKV----CQLCGNCVNVCPNDALN------- 48
Query: 103 LEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSIDINLN 162
L+EI++ + I+ + + C CG C + CP + + +E D
Sbjct: 49 ---------LREIELNGKTIKQIAYF--PTKCDLCGECVKVCPNN-LKIEN----DKLKG 92
Query: 163 LCMGCTACEKVCPKSAIKVENEMG----EITAENEISLNNDTCINCMVCSEICPVGAIVY 218
C+GC C CP S + +E + IT E + C+ C VC CPVGA+
Sbjct: 93 FCVGCMKCVDACPDSYVGMEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSI 152
Query: 219 EDGLMKLDDKMCIFCGKCEKNCPVTAIAIKQK 250
E +D CI+C C + CP AI + K
Sbjct: 153 EGEKAVVDKDSCIYCSICAQTCPWNAIFVAGK 184
Score = 90.5 bits (223), Expect = 5e-23
Identities = 69/260 (26%), Positives = 116/260 (44%), Gaps = 40/260 (15%)
Query: 30 LKDLIVPVERNLYVE------SNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCE 83
++ ++ P +RN+ + + C+ C +C CPV A+ K+ + + C+ C
Sbjct: 111 MEGVVEPAKRNITLPKEPIAVTEDCVGCGVCISECPVGALSIEGEKAVVD--KDSCIYCS 168
Query: 84 ICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDV-------THRKIR--LVKHEL---DE 131
ICA+TCP AI V ++ + N+V + D+ T + R +V +E+
Sbjct: 169 ICAQTCPWNAIFVAGKKSPKRDKNIVKFSVDSDLCIGCGDCTDKCPRDLIVLNEMVAVPP 228
Query: 132 ESCIKCGICERFCPTSAI--TVEKRNSIDI-------NLNLCMGCTACEKVCPKSAIKVE 182
+ C CG+C+ CP AI VE + I + C C C CP +AI V
Sbjct: 229 KGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCAYCGPCAIKCPNNAITVV 288
Query: 183 NEMG-EITAENEISLNND--TCINCMVCSEICP-----VGAIVY---EDGLMKLDDKMCI 231
N G E+ + + N+ CI C C + CP +G I++ E ++ +C
Sbjct: 289 NPKGLEMPSRKKTEKANEFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCD 348
Query: 232 FCGKCEKNCPVTAIAIKQKN 251
CGKC + CP + + K+
Sbjct: 349 SCGKCIETCPYDMLKLTGKS 368
Score = 86.7 bits (213), Expect = 7e-22
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 35/211 (16%)
Query: 43 VESNKCIRCELCYEMCPVDAIKEPSVKSPAEILPEKCVKCEICAKTCPVGAINVLEGRAK 102
V+S+ CI C C + CP D I + + P+ C C +C CPV AI ++ A
Sbjct: 198 VDSDLCIGCGDCTDKCPRDLIV---LNEMVAVPPKGCPACGLCKAACPVDAIELVVEYAS 254
Query: 103 ---LEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSIDI 159
+ ++ +V+ DEE C CG C CP +AITV +++
Sbjct: 255 PKPITDEGIVW-------------------DEEKCAYCGPCAIKCPNNAITVVNPKGLEM 295
Query: 160 ----------NLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISLNNDTCINCMVCSE 209
+C+ C AC + CP A+++ + I + + C +C C E
Sbjct: 296 PSRKKTEKANEFKMCIRCGACVQSCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIE 355
Query: 210 ICPVGAIVYEDGLMKLDDKMCIFCGKCEKNC 240
CP + K + C+ C KC + C
Sbjct: 356 TCPYDMLKLTGKSEKPLEGFCVMCLKCIEAC 386
Score = 74.3 bits (181), Expect = 4e-18
Identities = 59/196 (30%), Positives = 82/196 (41%), Gaps = 39/196 (19%)
Query: 31 KDLIVPVERNLYVESNKCIRCELCYEMCPVDAIK-EPSVKSPAEIL-------PEKCVKC 82
+DLIV + + V C C LC CPVDAI+ SP I EKC C
Sbjct: 215 RDLIV-LNEMVAVPPKGCPACGLCKAACPVDAIELVVEYASPKPITDEGIVWDEEKCAYC 273
Query: 83 EICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIKCGICER 142
CA CP AI V+ K +++ RK +E + CI+CG C +
Sbjct: 274 GPCAIKCPNNAITVVNP-------------KGLEMPSRKKTEKANEF--KMCIRCGACVQ 318
Query: 143 FCPTSAITVEK-------RNSIDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEIS 195
CP A+ + K I+ + NLC C C + CP +K +T ++E
Sbjct: 319 SCPNDALRIGKIIHNGKEYERIEFSPNLCDSCGKCIETCPYDMLK-------LTGKSEKP 371
Query: 196 LNNDTCINCMVCSEIC 211
L C+ C+ C E C
Sbjct: 372 LEG-FCVMCLKCIEAC 386
Score = 39.3 bits (90), Expect = 1e-07
Identities = 31/115 (26%), Positives = 41/115 (35%), Gaps = 27/115 (23%)
Query: 157 IDINLNLCMGCTACEKVCPKSAIK-------------VENEMGEITAENEISLNNDT--- 200
I IN C C ACE CP A+K V + EI LN T
Sbjct: 2 IKINTEDCYMCKACENSCPTEALKLNPFKVCQLCGNCVNVCPNDALNLREIELNGKTIKQ 61
Query: 201 -------CINCMVCSEICPVGAIVYEDGLMKLDDKMCIFCGKCEKNCPVTAIAIK 248
C C C ++CP + D L C+ C KC CP + + ++
Sbjct: 62 IAYFPTKCDLCGECVKVCPNNLKIENDKL----KGFCVGCMKCVDACPDSYVGME 112
Score = 27.3 bits (59), Expect = 5e-04
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 222 LMKLDDKMCIFCGKCEKNCPVTAIAI 247
++K++ + C C CE +CP A+ +
Sbjct: 1 MIKINTEDCYMCKACENSCPTEALKL 26