Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., NADH-quinone oxidoreductase subunit I from Magnetospirillum magneticum AMB-1

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 11/100 (11%)

Query: 107 NVVYELKEIDVTHR-KIRLVKHELDEESCIKCGICERFCPTSAITVE---------KRNS 156
           N  YE   + V  R +  L ++   EE CI C +CE  CP  AIT+E         +   
Sbjct: 35  NYPYEKGPLSVRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEPEPRDDGSRRARR 94

Query: 157 IDINLNLCMGCTACEKVCPKSAIKVENEMGEITAENEISL 196
            D+++  C+ C  C++ CP  AI VE    E   E    L
Sbjct: 95  YDLDMTKCIYCGLCQEACPVDAI-VEGPNFEYATETRAEL 133



 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 24/57 (42%), Positives = 30/57 (52%), Gaps = 10/57 (17%)

Query: 199 DTCINCMVCSEICPVGAIVYE-----DGLMK-----LDDKMCIFCGKCEKNCPVTAI 245
           + CI C +C  ICP  AI  E     DG  +     LD   CI+CG C++ CPV AI
Sbjct: 61  ERCIACKLCEAICPAQAITIEPEPRDDGSRRARRYDLDMTKCIYCGLCQEACPVDAI 117



 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 164 CMGCTACEKVCPKSAIKVENEMGEITAEN--EISLNNDTCINCMVCSEICPVGAIV 217
           C+ C  CE +CP  AI +E E  +  +       L+   CI C +C E CPV AIV
Sbjct: 63  CIACKLCEAICPAQAITIEPEPRDDGSRRARRYDLDMTKCIYCGLCQEACPVDAIV 118



 Score = 45.8 bits (107), Expect = 5e-10
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 16/73 (21%)

Query: 77  EKCVKCEICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIK 136
           E+C+ C++C   CP  AI +              E +  D   R+ R  +++LD   CI 
Sbjct: 61  ERCIACKLCEAICPAQAITI--------------EPEPRDDGSRRAR--RYDLDMTKCIY 104

Query: 137 CGICERFCPTSAI 149
           CG+C+  CP  AI
Sbjct: 105 CGLCQEACPVDAI 117



 Score = 41.6 bits (96), Expect = 1e-08
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 8/56 (14%)

Query: 47  KCIRCELCYEMCPVDAIK-EPSVKSPA-------EILPEKCVKCEICAKTCPVGAI 94
           +CI C+LC  +CP  AI  EP  +          ++   KC+ C +C + CPV AI
Sbjct: 62  RCIACKLCEAICPAQAITIEPEPRDDGSRRARRYDLDMTKCIYCGLCQEACPVDAI 117



 Score = 35.0 bits (79), Expect = 9e-07
 Identities = 15/27 (55%), Positives = 17/27 (62%)

Query: 39  RNLYVESNKCIRCELCYEMCPVDAIKE 65
           R   ++  KCI C LC E CPVDAI E
Sbjct: 93  RRYDLDMTKCIYCGLCQEACPVDAIVE 119



 Score = 26.2 bits (56), Expect = 4e-04
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 227 DKMCIFCGKCEKNCPVTAIAIK 248
           ++ CI C  CE  CP  AI I+
Sbjct: 60  EERCIACKLCEAICPAQAITIE 81