Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 891 a.a., formate dehydrogenase subunit alpha from Magnetospirillum magneticum AMB-1

 Score = 48.1 bits (113), Expect = 6e-10
 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 12/112 (10%)

Query: 142 RFCPTSAITVEKRN--SIDINLNLCMGCTACEKVCPKSAIKVENEMG--------EITAE 191
           RF P++A      +  ++ + L+ C+ CT C + C +  ++V + +G         IT +
Sbjct: 118 RFAPSAAPVRPDTSHPAMAVRLDACIHCTLCLRACRE--VQVNDVIGMSGRGADSRITFD 175

Query: 192 NEISLNNDTCINCMVCSEICPVGAIVYEDGLMKLDDKMCIFCGKCEKNCPVT 243
              S+   +C+ C  C + CP GA++   G ++++  +   C  C   C VT
Sbjct: 176 FAQSMGASSCVGCGECVQACPTGALLPAAGPVRVERSVDSLCPYCGVGCQVT 227



 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 21/137 (15%)

Query: 59  PVDAIKEPSVKSPA-EILPEKCVKCEICAKTCPVGAINVLEGRAKLEEDN-VVYELKEID 116
           P  A   P    PA  +  + C+ C +C + C    +N + G +    D+ + ++  +  
Sbjct: 121 PSAAPVRPDTSHPAMAVRLDACIHCTLCLRACREVQVNDVIGMSGRGADSRITFDFAQ-- 178

Query: 117 VTHRKIRLVKHELDEESCIKCGICERFCPTSAI-----TVEKRNSIDINLNLC-MGCTAC 170
                       +   SC+ CG C + CPT A+      V    S+D     C +GC   
Sbjct: 179 -----------SMGASSCVGCGECVQACPTGALLPAAGPVRVERSVDSLCPYCGVGCQVT 227

Query: 171 EKVCPKSAIKVENEMGE 187
             V     +  +   GE
Sbjct: 228 YHVAGGDIVGAKGRDGE 244



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 14/71 (19%)

Query: 189 TAENEISLNNDTCINCMVCSEIC---PVGAIVYEDG-----------LMKLDDKMCIFCG 234
           T+   +++  D CI+C +C   C    V  ++   G              +    C+ CG
Sbjct: 130 TSHPAMAVRLDACIHCTLCLRACREVQVNDVIGMSGRGADSRITFDFAQSMGASSCVGCG 189

Query: 235 KCEKNCPVTAI 245
           +C + CP  A+
Sbjct: 190 ECVQACPTGAL 200



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 20/74 (27%), Positives = 27/74 (36%), Gaps = 12/74 (16%)

Query: 43  VESNKCIRCELCYEMCPV----DAIKEPSVKSPAEIL--------PEKCVKCEICAKTCP 90
           V  + CI C LC   C      D I      + + I            CV C  C + CP
Sbjct: 137 VRLDACIHCTLCLRACREVQVNDVIGMSGRGADSRITFDFAQSMGASSCVGCGECVQACP 196

Query: 91  VGAINVLEGRAKLE 104
            GA+    G  ++E
Sbjct: 197 TGALLPAAGPVRVE 210