Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., NADH-quinone oxidoreductase, chain I from Enterobacter asburiae PDN3

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 11/94 (11%)

Query: 121 KIRLVKHELDEESCIKCGICERFCPTSAITVEKRNSID---------INLNLCMGCTACE 171
           +I L +     E C+ C +C   CP   I+++K  ++D         IN + C+ C  CE
Sbjct: 47  RIVLTRDPDGSERCVACNLCAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCE 106

Query: 172 KVCPKSAIKV--ENEMGEITAENEISLNNDTCIN 203
           + CP +AI++  + E+GE   ++ +    D  I+
Sbjct: 107 EACPTTAIQLTPDFELGEYKRQDLVYEKEDLLIS 140



 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 10/60 (16%)

Query: 198 NDTCINCMVCSEICPVGAIVYE-----DG-----LMKLDDKMCIFCGKCEKNCPVTAIAI 247
           ++ C+ C +C+  CPVG I  +     DG       +++   CIFCG CE+ CP TAI +
Sbjct: 57  SERCVACNLCAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116



 Score = 45.8 bits (107), Expect = 6e-10
 Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 16/73 (21%)

Query: 77  EKCVKCEICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIK 136
           E+CV C +CA  CPVG I++   +A+  +     E   I+ +               CI 
Sbjct: 58  ERCVACNLCAVACPVGCISL--QKAETVDGRWYPEFFRINFSR--------------CIF 101

Query: 137 CGICERFCPTSAI 149
           CG+CE  CPT+AI
Sbjct: 102 CGLCEEACPTTAI 114



 Score = 38.5 bits (88), Expect = 9e-08
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 10/81 (12%)

Query: 45  SNKCIRCELCYEMCPVDAIKEPSVKS-PAEILPE-------KCVKCEICAKTCPVGAINV 96
           S +C+ C LC   CPV  I     ++      PE       +C+ C +C + CP  AI +
Sbjct: 57  SERCVACNLCAVACPVGCISLQKAETVDGRWYPEFFRINFSRCIFCGLCEEACPTTAIQL 116

Query: 97  LEG--RAKLEEDNVVYELKEI 115
                  + +  ++VYE +++
Sbjct: 117 TPDFELGEYKRQDLVYEKEDL 137



 Score = 34.7 bits (78), Expect = 1e-06
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 4/56 (7%)

Query: 164 CMGCTACEKVCPKSAI---KVENEMGEITAENEISLNNDTCINCMVCSEICPVGAI 216
           C+ C  C   CP   I   K E   G    E    +N   CI C +C E CP  AI
Sbjct: 60  CVACNLCAVACPVGCISLQKAETVDGRWYPEF-FRINFSRCIFCGLCEEACPTTAI 114



 Score = 27.7 bits (60), Expect = 2e-04
 Identities = 10/22 (45%), Positives = 14/22 (63%)

Query: 43  VESNKCIRCELCYEMCPVDAIK 64
           +  ++CI C LC E CP  AI+
Sbjct: 94  INFSRCIFCGLCEEACPTTAIQ 115



 Score = 23.1 bits (48), Expect = 0.004
 Identities = 7/20 (35%), Positives = 12/20 (60%)

Query: 230 CIFCGKCEKNCPVTAIAIKQ 249
           C+ C  C   CPV  I++++
Sbjct: 60  CVACNLCAVACPVGCISLQK 79