Pairwise Alignments

Query, 252 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 163 a.a., NADH ubiquinone oxidoreductase chain I from Agrobacterium fabrum C58

 Score = 49.7 bits (117), Expect = 4e-11
 Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 11/79 (13%)

Query: 131 EESCIKCGICERFCPTSAITVE---KRNS-------IDINLNLCMGCTACEKVCPKSAIK 180
           EE CI C +CE  CP  AIT+E   +RN         DI++  C+ C  C++ CP  AI 
Sbjct: 60  EERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI- 118

Query: 181 VENEMGEITAENEISLNND 199
           VE    E   E    L  D
Sbjct: 119 VEGPNFEFATETREELYFD 137



 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 15/73 (20%)

Query: 77  EKCVKCEICAKTCPVGAINVLEGRAKLEEDNVVYELKEIDVTHRKIRLVKHELDEESCIK 136
           E+C+ C++C   CP  AI +  G             +  D T R +R   +++D   CI 
Sbjct: 61  ERCIACKLCEAICPAQAITIEAGP------------RRNDGTRRTVR---YDIDMVKCIY 105

Query: 137 CGICERFCPTSAI 149
           CG C+  CP  AI
Sbjct: 106 CGFCQEACPVDAI 118



 Score = 45.4 bits (106), Expect = 7e-10
 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 11/58 (18%)

Query: 199 DTCINCMVCSEICPVGAIVYEDGLMK-----------LDDKMCIFCGKCEKNCPVTAI 245
           + CI C +C  ICP  AI  E G  +           +D   CI+CG C++ CPV AI
Sbjct: 61  ERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAI 118



 Score = 43.9 bits (102), Expect = 2e-09
 Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 7/59 (11%)

Query: 164 CMGCTACEKVCPKSAIKVE-----NEMGEITAENEISLNNDTCINCMVCSEICPVGAIV 217
           C+ C  CE +CP  AI +E     N+    T   +I +    CI C  C E CPV AIV
Sbjct: 63  CIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVK--CIYCGFCQEACPVDAIV 119



 Score = 37.7 bits (86), Expect = 1e-07
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 13/59 (22%)

Query: 47  KCIRCELCYEMCPVDAI-----------KEPSVKSPAEILPEKCVKCEICAKTCPVGAI 94
           +CI C+LC  +CP  AI              +V+   +++  KC+ C  C + CPV AI
Sbjct: 62  RCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMV--KCIYCGFCQEACPVDAI 118



 Score = 32.7 bits (73), Expect = 5e-06
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 43  VESNKCIRCELCYEMCPVDAIKE 65
           ++  KCI C  C E CPVDAI E
Sbjct: 98  IDMVKCIYCGFCQEACPVDAIVE 120



 Score = 26.2 bits (56), Expect = 4e-04
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 227 DKMCIFCGKCEKNCPVTAIAIK 248
           ++ CI C  CE  CP  AI I+
Sbjct: 60  EERCIACKLCEAICPAQAITIE 81