Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 689 a.a., Iron-sulfur cluster-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 31  IEINPEICILCNRCLEVCPVTAISSNF--PEVPDIDNKCVYCNTCVETCPVDAIKI 84
           IE+N + C LC  C+  CP +A+  N   P++  I+  CV C  C  TCP DAI +
Sbjct: 553 IEVNKDRCTLCLSCVSACPASALQDNTERPQLRFIEKNCVQCGLCASTCPEDAITL 608



 Score = 46.6 bits (109), Expect = 8e-10
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 107 LDYNRKKCVMCLVCTKNCPFEAISESDD--TISFNMDKCVLCGHCEEICPAKAIKLE 161
           ++ N+ +C +CL C   CP  A+ ++ +   + F    CV CG C   CP  AI L+
Sbjct: 553 IEVNKDRCTLCLSCVSACPASALQDNTERPQLRFIEKNCVQCGLCASTCPEDAITLQ 609



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 14/41 (34%), Positives = 23/41 (56%)

Query: 22  LDSQYISNKIEINPEICILCNRCLEVCPVTAISSNFPEVPD 62
           + S+   N+I +NP +C+ C  C  VCP  A+S  +P   +
Sbjct: 323 IHSEIKRNQIVVNPNLCVGCGACTTVCPTGALSYAYPRASE 363



 Score = 38.1 bits (87), Expect = 3e-07
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 16/66 (24%)

Query: 65  NKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNC 124
           ++C  C +CV  CP  A+                ++  +  +L +  K CV C +C   C
Sbjct: 558 DRCTLCLSCVSACPASAL----------------QDNTERPQLRFIEKNCVQCGLCASTC 601

Query: 125 PFEAIS 130
           P +AI+
Sbjct: 602 PEDAIT 607



 Score = 37.4 bits (85), Expect = 5e-07
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 41  CNRCLEVCPVTAISSNFP--EVPDIDNKCVYCNTCVETCPVDAIKITKTR 88
           CN C+E+C   AI S     ++    N CV C  C   CP  A+     R
Sbjct: 311 CNACVEICSALAIHSEIKRNQIVVNPNLCVGCGACTTVCPTGALSYAYPR 360



 Score = 36.2 bits (82), Expect = 1e-06
 Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 16/66 (24%)

Query: 65  NKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNC 124
           N+ V CN CVE C                  L I + +K  ++  N   CV C  CT  C
Sbjct: 306 NETVGCNACVEICSA----------------LAIHSEIKRNQIVVNPNLCVGCGACTTVC 349

Query: 125 PFEAIS 130
           P  A+S
Sbjct: 350 PTGALS 355



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 39/177 (22%), Positives = 62/177 (35%), Gaps = 54/177 (30%)

Query: 33  INPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCP-VDAIKITK-TRVR 90
           I+ ++C  CN C+  CP  AI  ++    D+D +C     CV+ C  V AI   +  +  
Sbjct: 181 IDLDLCTRCNACVAACPEGAIGLDYQI--DLD-QCRDHRACVKACEAVGAINFQREAQSH 237

Query: 91  VENGNLIIENR-----------------------------------------------LK 103
            E  +++++ R                                                K
Sbjct: 238 SERFDVVLDLRDAPAFTQHAHPQGYFHLRGGLQAEGAMATVVRLRDLVGEFEKPKFFTYK 297

Query: 104 SKKLDYNRKKCVMCLVCTKNCPFEAISES--DDTISFNMDKCVLCGHCEEICPAKAI 158
            K   + R + V C  C + C   AI      + I  N + CV CG C  +CP  A+
Sbjct: 298 QKLCAHGRNETVGCNACVEICSALAIHSEIKRNQIVVNPNLCVGCGACTTVCPTGAL 354



 Score = 30.4 bits (67), Expect = 6e-05
 Identities = 11/25 (44%), Positives = 15/25 (60%)

Query: 135 TISFNMDKCVLCGHCEEICPAKAIK 159
           +I  N D+C LC  C   CPA A++
Sbjct: 552 SIEVNKDRCTLCLSCVSACPASALQ 576



 Score = 24.3 bits (51), Expect = 0.004
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 139 NMDKCVLCGHCEEICPAKAIKLE 161
           ++D C  C  C   CP  AI L+
Sbjct: 182 DLDLCTRCNACVAACPEGAIGLD 204