Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., NADH-quinone oxidoreductase subunit I from Magnetospirillum magneticum AMB-1

 Score = 46.2 bits (108), Expect = 3e-10
 Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 19/88 (21%)

Query: 36  EICILCNRCLEVCPVTAIS---------SNFPEVPDID-NKCVYCNTCVETCPVDAIKIT 85
           E CI C  C  +CP  AI+         S      D+D  KC+YC  C E CPVDAI   
Sbjct: 61  ERCIACKLCEAICPAQAITIEPEPRDDGSRRARRYDLDMTKCIYCGLCQEACPVDAI--- 117

Query: 86  KTRVRVENGNLIIENRLKSKKLDYNRKK 113
                VE  N       ++ +L YN+ K
Sbjct: 118 -----VEGPNFEYATETRA-ELMYNKSK 139



 Score = 42.4 bits (98), Expect = 4e-09
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 10/57 (17%)

Query: 112 KKCVMCLVCTKNCPFEAIS----ESDD------TISFNMDKCVLCGHCEEICPAKAI 158
           ++C+ C +C   CP +AI+      DD          +M KC+ CG C+E CP  AI
Sbjct: 61  ERCIACKLCEAICPAQAITIEPEPRDDGSRRARRYDLDMTKCIYCGLCQEACPVDAI 117



 Score = 42.0 bits (97), Expect = 5e-09
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%)

Query: 61  PDIDNKCVYCNTCVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVC 120
           P+ + +C+ C  C   CP  AI I +   R +          ++++ D +  KC+ C +C
Sbjct: 57  PNGEERCIACKLCEAICPAQAITI-EPEPRDDGSR-------RARRYDLDMTKCIYCGLC 108

Query: 121 TKNCPFEAISE 131
            + CP +AI E
Sbjct: 109 QEACPVDAIVE 119



 Score = 32.0 bits (71), Expect = 5e-06
 Identities = 11/21 (52%), Positives = 16/21 (76%)

Query: 141 DKCVLCGHCEEICPAKAIKLE 161
           ++C+ C  CE ICPA+AI +E
Sbjct: 61  ERCIACKLCEAICPAQAITIE 81



 Score = 27.7 bits (60), Expect = 9e-05
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 23  DSQYISNKIEINPEICILCNRCLEVCPVTAI 53
           D    + + +++   CI C  C E CPV AI
Sbjct: 87  DGSRRARRYDLDMTKCIYCGLCQEACPVDAI 117