Pairwise Alignments

Query, 161 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 208 a.a., putative 4Fe-4S ferridoxin-type protein; FNR, Nar, NarP-regulated protein; putative subunit of YdhYVWXUT oxidoreductase complex from Escherichia coli BL21

 Score = 48.9 bits (115), Expect = 5e-11
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 18/88 (20%)

Query: 73  CVETCPVDAIKITKTRVRVENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAISES 132
           C+  CP+ AI   +                K   +  + K+C+ C  CT  CP+  +  +
Sbjct: 131 CMNVCPIGAITWQQ----------------KEGCITVDHKRCIGCSACTTACPW--MMAT 172

Query: 133 DDTISFNMDKCVLCGHCEEICPAKAIKL 160
            +T S    KCVLCG C   CP  A+K+
Sbjct: 173 VNTESKKSSKCVLCGECANACPTGALKI 200



 Score = 38.9 bits (89), Expect = 5e-08
 Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 31  IEINPEICILCNRCLEVCPVTAISSNFPEVPDIDNKCVYCNTCVETCPVDAIKI 84
           I ++ + CI C+ C   CP    + N        +KCV C  C   CP  A+KI
Sbjct: 149 ITVDHKRCIGCSACTTACPWMMATVNTESKKS--SKCVLCGECANACPTGALKI 200



 Score = 37.0 bits (84), Expect = 2e-07
 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 24/98 (24%)

Query: 36  EICILCN--RCLEVCPVTAISSNFPE-VPDIDNK-CVYCNTCVETCPVDAIKITKTRVRV 91
           + C  C   +C+ VCP+ AI+    E    +D+K C+ C+ C   CP             
Sbjct: 121 DTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCSACTTACPW------------ 168

Query: 92  ENGNLIIENRLKSKKLDYNRKKCVMCLVCTKNCPFEAI 129
               ++     +SKK      KCV+C  C   CP  A+
Sbjct: 169 ----MMATVNTESKK----SSKCVLCGECANACPTGAL 198