Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 162 a.a., NADH-quinone oxidoreductase subunit I from Xanthobacter sp. DMC5

 Score = 49.7 bits (117), Expect = 6e-11
 Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 13/85 (15%)

Query: 125 EEVCVSCGTCENACPVDAIS----------HNNTGLYEIDVNLCVSCKNCLKACPVENAI 174
           EE C++C  CE  CP  AI+             T  Y+ID+  C+ C  C +ACPV+ AI
Sbjct: 59  EERCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGFCQEACPVD-AI 117

Query: 175 VTYSEPELSEKIEIAQNIKFDRERL 199
           V    P      E  + + +D+E+L
Sbjct: 118 V--EGPNFEFATETREELYYDKEKL 140



 Score = 49.3 bits (116), Expect = 7e-11
 Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 15/77 (19%)

Query: 280 EEKCIGCRICYRSCNVPEAILI---------SKETNLPYINPEYCVRCGLCQNACPVDAI 330
           EE+CI C++C   C   +AI I         ++ T    I+   C+ CG CQ ACPVDAI
Sbjct: 59  EERCIACKLCEAICPA-QAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGFCQEACPVDAI 117

Query: 331 -----DYLKTETSEDLY 342
                    TET E+LY
Sbjct: 118 VEGPNFEFATETREELY 134



 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%)

Query: 47  EKCISCSACKESCPSDAISMEF----NEEFKKEMPV-FDAGSCINCGNCVESCPTNVLEM 101
           E+CI+C  C+  CP+ AI++E     N+  ++      D   CI CG C E+CP + +  
Sbjct: 60  ERCIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGFCQEACPVDAIVE 119

Query: 102 G 102
           G
Sbjct: 120 G 120



 Score = 39.7 bits (91), Expect = 6e-08
 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 8/62 (12%)

Query: 84  CINCGNCVESCPTNVL--EMGTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVD 141
           CI C  C   CP   +  E G  R +         +     ID   C+ CG C+ ACPVD
Sbjct: 62  CIACKLCEAICPAQAITIEAGPRRNDGTR------RTTRYDIDMVKCIYCGFCQEACPVD 115

Query: 142 AI 143
           AI
Sbjct: 116 AI 117



 Score = 34.3 bits (77), Expect = 2e-06
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 245 CIKSGKCLEVCPTTAIRIGVPEKI---TKRTAECYIVDEEKCIGCRICYRSCNV 295
           CI    C  +CP  AI I    +    T+RT   Y +D  KCI C  C  +C V
Sbjct: 62  CIACKLCEAICPAQAITIEAGPRRNDGTRRTTR-YDIDMVKCIYCGFCQEACPV 114



 Score = 33.9 bits (76), Expect = 3e-06
 Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 16/80 (20%)

Query: 221 CIGCGNCVDVCPG-SIDLER---------------LKVTSCIKSGKCLEVCPTTAIRIGV 264
           CI C  C  +CP  +I +E                + +  CI  G C E CP  AI  G 
Sbjct: 62  CIACKLCEAICPAQAITIEAGPRRNDGTRRTTRYDIDMVKCIYCGFCQEACPVDAIVEGP 121

Query: 265 PEKITKRTAECYIVDEEKCI 284
             +    T E    D+EK +
Sbjct: 122 NFEFATETREELYYDKEKLL 141



 Score = 33.1 bits (74), Expect = 5e-06
 Identities = 15/28 (53%), Positives = 17/28 (60%)

Query: 48  KCISCSACKESCPSDAISMEFNEEFKKE 75
           KCI C  C+E+CP DAI    N EF  E
Sbjct: 101 KCIYCGFCQEACPVDAIVEGPNFEFATE 128