Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., formate hydrogenlyase complex iron-sulfur protein (NCBI) from Escherichia coli BW25113

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 22/56 (39%), Positives = 36/56 (64%)

Query: 46  PEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101
           P++CI C+AC  +CPS+A+++E +    +    F+ G CI CG C E CPT  +++
Sbjct: 37  PQQCIGCAACVNACPSNALTVETDLATGELAWEFNLGHCIFCGRCEEVCPTAAIKL 92



 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 12/102 (11%)

Query: 42  IFDLPEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101
           +F   +K I       S P + I+++ N   K E    +   CI C  CV +CP+N L +
Sbjct: 1   MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQ---NPQQCIGCAACVNACPSNALTV 57

Query: 102 GTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAI 143
            T      EL W      NL      C+ CG CE  CP  AI
Sbjct: 58  ET-DLATGELAWE----FNL----GHCIFCGRCEEVCPTAAI 90



 Score = 48.9 bits (115), Expect = 1e-10
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 12/98 (12%)

Query: 214 PRIVPSLCIGCGNCVDVCPGSI-----DLE------RLKVTSCIKSGKCLEVCPTTAIRI 262
           P   P  CIGC  CV+ CP +      DL          +  CI  G+C EVCPT AI++
Sbjct: 33  PEQNPQQCIGCAACVNACPSNALTVETDLATGELAWEFNLGHCIFCGRCEEVCPTAAIKL 92

Query: 263 GVPEKITKRTAECYIVDEEKCI-GCRICYRSCNVPEAI 299
               ++     E ++      +  CR+C R   V + I
Sbjct: 93  SQEYELAVWKKEDFLQQSRFALCNCRVCNRPFAVQKEI 130



 Score = 39.3 bits (90), Expect = 9e-08
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 8/74 (10%)

Query: 128 CVSCGTCENACPVDAISHNN---TG--LYEIDVNLCVSCKNCLKACPVENAIVTYSEPEL 182
           C+ C  C NACP +A++      TG   +E ++  C+ C  C + CP   AI    E EL
Sbjct: 40  CIGCAACVNACPSNALTVETDLATGELAWEFNLGHCIFCGRCEEVCPTA-AIKLSQEYEL 98

Query: 183 S--EKIEIAQNIKF 194
           +  +K +  Q  +F
Sbjct: 99  AVWKKEDFLQQSRF 112



 Score = 36.6 bits (83), Expect = 6e-07
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 9/56 (16%)

Query: 281 EKCIGCRICYRSCNVPEAILISKETNLPY------INPEYCVRCGLCQNACPVDAI 330
           ++CIGC  C  +C    +  ++ ET+L         N  +C+ CG C+  CP  AI
Sbjct: 38  QQCIGCAACVNAC---PSNALTVETDLATGELAWEFNLGHCIFCGRCEEVCPTAAI 90



 Score = 34.3 bits (77), Expect = 3e-06
 Identities = 27/106 (25%), Positives = 40/106 (37%), Gaps = 30/106 (28%)

Query: 129 VSCGTCENACPVD--AISHNNTGLYEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKI 186
           +  GT  ++ P++  A+  N  G  E +   C+ C  C+ ACP  NA+   ++    E  
Sbjct: 9   IKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCAACVNACP-SNALTVETDLATGE-- 65

Query: 187 EIAQNIKFDRERLGSEFKEKSDVIAEIPRIVPSLCIGCGNCVDVCP 232
                       L  EF                 CI CG C +VCP
Sbjct: 66  ------------LAWEFN-------------LGHCIFCGRCEEVCP 86



 Score = 32.3 bits (72), Expect = 1e-05
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 308 PYINPEYCVRCGLCQNACPVDAI 330
           P  NP+ C+ C  C NACP +A+
Sbjct: 33  PEQNPQQCIGCAACVNACPSNAL 55