Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) from Enterobacter asburiae PDN3

 Score = 55.1 bits (131), Expect = 2e-12
 Identities = 22/56 (39%), Positives = 36/56 (64%)

Query: 46  PEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101
           P++CI C+AC  +CPS+A+++E + +  +    F+ G CI CG C E CPT  + +
Sbjct: 37  PQQCIGCAACVNACPSNALTVETDLKTGELAWQFNLGRCIFCGRCEEVCPTVAIRL 92



 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 12/98 (12%)

Query: 214 PRIVPSLCIGCGNCVDVCPGSI-----DLE------RLKVTSCIKSGKCLEVCPTTAIRI 262
           P   P  CIGC  CV+ CP +      DL+      +  +  CI  G+C EVCPT AIR+
Sbjct: 33  PEHNPQQCIGCAACVNACPSNALTVETDLKTGELAWQFNLGRCIFCGRCEEVCPTVAIRL 92

Query: 263 GVPEKITKRTAECYIVDEE-KCIGCRICYRSCNVPEAI 299
               ++     E ++         CR+C R   V + I
Sbjct: 93  SQEYELAVWKKEDFLQQSRFDLCNCRVCRRPFAVQKEI 130



 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 27/145 (18%)

Query: 42  IFDLPEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEM 101
           +F   +K I       S P + + ++ N   K   P  +   CI C  CV +CP+N L +
Sbjct: 1   MFTFIKKAIKTGTQTSSYPLEPMPVDKNFRGK---PEHNPQQCIGCAACVNACPSNALTV 57

Query: 102 GTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAISHNNTGLYEIDV------ 155
            T  K   EL W      NL      C+ CG CE  CP  AI  +    YE+ V      
Sbjct: 58  ETDLKTG-ELAWQ----FNL----GRCIFCGRCEEVCPTVAIRLSQE--YELAVWKKEDF 106

Query: 156 ------NLCVSCKNCLKACPVENAI 174
                 +LC +C+ C +   V+  I
Sbjct: 107 LQQSRFDLC-NCRVCRRPFAVQKEI 130



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 9/56 (16%)

Query: 281 EKCIGCRICYRSCNVPEAILISKETNLP------YINPEYCVRCGLCQNACPVDAI 330
           ++CIGC  C  +C    +  ++ ET+L         N   C+ CG C+  CP  AI
Sbjct: 38  QQCIGCAACVNAC---PSNALTVETDLKTGELAWQFNLGRCIFCGRCEEVCPTVAI 90



 Score = 32.3 bits (72), Expect = 1e-05
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 308 PYINPEYCVRCGLCQNACPVDAI 330
           P  NP+ C+ C  C NACP +A+
Sbjct: 33  PEHNPQQCIGCAACVNACPSNAL 55