Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 192 a.a., electron transport complex, RnfABCDGE type, B subunit from Enterobacter asburiae PDN3

 Score = 49.3 bits (116), Expect = 9e-11
 Identities = 19/50 (38%), Positives = 27/50 (54%)

Query: 122 LIDEEVCVSCGTCENACPVDAISHNNTGLYEIDVNLCVSCKNCLKACPVE 171
           +IDE  C+ C  C  ACPVDAI      ++ +  +LC  C  C+  CP +
Sbjct: 111 VIDEANCIGCTKCIQACPVDAIVGATRAMHTVVADLCTGCNLCVAPCPTQ 160



 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 19/148 (12%)

Query: 205 EKSDVIAEIPRIVP-SLCIGCGNCVDVCPG------SIDLERLKVTSCIKSGKCLEVCPT 257
           E   V+ +I  ++P S C  CG      PG      ++ ++  K+  C   G+ + +   
Sbjct: 32  EDDPVVEKIDELLPQSQCGQCGY-----PGCRPYAEAVGIQGEKINRCAPGGEAVMLKIA 86

Query: 258 TAIRIGVPE-----KITKRTAECYIVDEEKCIGCRICYRSCNVPEAILISKETNLPYINP 312
             + +         ++ +      ++DE  CIGC  C ++C  P   ++     +  +  
Sbjct: 87  ALLNVDPQPVDGDAEVQEPVRALAVIDEANCIGCTKCIQAC--PVDAIVGATRAMHTVVA 144

Query: 313 EYCVRCGLCQNACPVDAIDYLKTETSED 340
           + C  C LC   CP   I+    ET+ +
Sbjct: 145 DLCTGCNLCVAPCPTQCIELRPVETTTE 172



 Score = 42.7 bits (99), Expect = 8e-09
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 49  CISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLRKEA 108
           CI C+ C ++CP DAI         + M    A  C  C  CV  CPT  +E+  +    
Sbjct: 117 CIGCTKCIQACPVDAIVGA-----TRAMHTVVADLCTGCNLCVAPCPTQCIELRPVETTT 171

Query: 109 KELLWNVPKI 118
           +   W++  I
Sbjct: 172 ESWKWDLQTI 181



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 14/74 (18%)

Query: 70  EEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEVCV 129
           +E  + + V D  +CI C  C+++CP + +   T                   +  ++C 
Sbjct: 103 QEPVRALAVIDEANCIGCTKCIQACPVDAIVGATRAMHT--------------VVADLCT 148

Query: 130 SCGTCENACPVDAI 143
            C  C   CP   I
Sbjct: 149 GCNLCVAPCPTQCI 162