Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 231 a.a., ferredoxin-type protein NapG from Escherichia coli ECRC62

 Score = 60.1 bits (144), Expect = 6e-14
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 33/142 (23%)

Query: 219 SLCIGCGNCVDVCPGSIDLERLKVTSCIKSG-----------------KCLEVCPTTAIR 261
           S C+ CG CV  CP    L+   + S + +G                  C +VCP+ A+ 
Sbjct: 59  SACVRCGQCVQACPYD-TLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALD 117

Query: 262 IGVPEKITKRTAECYIVDEEKCIG-----CRICYRSC-NVPEAILISKETN--------- 306
             +      R     +VD+E C+      C +CYR C  + EAI +  E N         
Sbjct: 118 REIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARF 177

Query: 307 LPYINPEYCVRCGLCQNACPVD 328
           LP ++ + C  CG C+  C ++
Sbjct: 178 LPTVHSDACTGCGKCEKVCVLE 199



 Score = 53.5 bits (127), Expect = 6e-12
 Identities = 39/164 (23%), Positives = 60/164 (36%), Gaps = 38/164 (23%)

Query: 81  AGSCINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPV 140
           A +C+ CG CV++CP + L++ TL   A  L    P  +   I  E+C     C   CP 
Sbjct: 58  ASACVRCGQCVQACPYDTLKLATL---ASGLSAGTPYFVARDIPCEMCEDI-PCAKVCPS 113

Query: 141 DAISHNNTGLYEIDVNLCV-------------SCKNCLKACPVENAIVTYSEPELSEKIE 187
            A+      + +  + L V              C  C + CP  +  +T    EL     
Sbjct: 114 GALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITL---ELERNTR 170

Query: 188 IAQNIKFDRERLGSEFKEKSDVIAEIPRIVPSLCIGCGNCVDVC 231
             ++ +F                  +P +    C GCG C  VC
Sbjct: 171 TGKHARF------------------LPTVHSDACTGCGKCEKVC 196



 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 38/164 (23%), Positives = 64/164 (39%), Gaps = 21/164 (12%)

Query: 49  CISCSACKESCPSDAISM-EFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLRKE 107
           C+ C  C ++CP D + +           P F A   I C  C +     V   G L +E
Sbjct: 61  CVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARD-IPCEMCEDIPCAKVCPSGALDRE 119

Query: 108 AKELLWNVPKIINLLIDEEVCVS-----CGTCENACP-------VDAISHNNTG-----L 150
             E + +    + +L+D+E C++     C  C   CP       ++   +  TG     L
Sbjct: 120 I-ESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFL 178

Query: 151 YEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKF 194
             +  + C  C  C K C +E   +      L+ K E+  + +F
Sbjct: 179 PTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLA-KGELGHHYRF 221



 Score = 29.6 bits (65), Expect = 9e-05
 Identities = 10/16 (62%), Positives = 11/16 (68%)

Query: 315 CVRCGLCQNACPVDAI 330
           CVRCG C  ACP D +
Sbjct: 61  CVRCGQCVQACPYDTL 76