Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 189 a.a., hydrogenase 4 subunit H from Dickeya dianthicola ME23

 Score = 48.1 bits (113), Expect = 2e-10
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 46 PEKCISCSACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVL 99
          P +CI C+AC  +CP++A++M  + +          G CI CG C E CPT  +
Sbjct: 37 PAQCIGCAACTMACPANALTMANDLDNGTRTWQLFLGRCIFCGRCEEVCPTRAI 90



 Score = 46.2 bits (108), Expect = 7e-10
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 12/90 (13%)

Query: 214 PRIVPSLCIGCGNCVDVCPGSI-----DLE------RLKVTSCIKSGKCLEVCPTTAIRI 262
           P   P+ CIGC  C   CP +      DL+      +L +  CI  G+C EVCPT AI +
Sbjct: 33  PEYDPAQCIGCAACTMACPANALTMANDLDNGTRTWQLFLGRCIFCGRCEEVCPTRAIVL 92

Query: 263 GVP-EKITKRTAECYIVDEEKCIGCRICYR 291
               E      A+ Y     + + C +C R
Sbjct: 93  SQEFEMAVANKADLYQRATFQLLNCHVCQR 122



 Score = 43.5 bits (101), Expect = 5e-09
 Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 9/67 (13%)

Query: 77  PVFDAGSCINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCEN 136
           P +D   CI C  C  +CP N L M          L N  +   L +    C+ CG CE 
Sbjct: 33  PEYDPAQCIGCAACTMACPANALTMA-------NDLDNGTRTWQLFLGR--CIFCGRCEE 83

Query: 137 ACPVDAI 143
            CP  AI
Sbjct: 84  VCPTRAI 90



 Score = 42.4 bits (98), Expect = 1e-08
 Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 6/77 (7%)

Query: 124 DEEVCVSCGTCENACPVDAIS-----HNNTGLYEIDVNLCVSCKNCLKACPVENAIVTYS 178
           D   C+ C  C  ACP +A++      N T  +++ +  C+ C  C + CP    +++  
Sbjct: 36  DPAQCIGCAACTMACPANALTMANDLDNGTRTWQLFLGRCIFCGRCEEVCPTRAIVLSQE 95

Query: 179 -EPELSEKIEIAQNIKF 194
            E  ++ K ++ Q   F
Sbjct: 96  FEMAVANKADLYQRATF 112



 Score = 33.1 bits (74), Expect = 6e-06
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 279 DEEKCIGCRICYRSCNVPEAIL---ISKETNLPYINPEYCVRCGLCQNACPVDAI 330
           D  +CIGC  C  +C      +   +   T    +    C+ CG C+  CP  AI
Sbjct: 36  DPAQCIGCAACTMACPANALTMANDLDNGTRTWQLFLGRCIFCGRCEEVCPTRAI 90



 Score = 28.1 bits (61), Expect = 2e-04
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 308 PYINPEYCVRCGLCQNACPVDAI 330
           P  +P  C+ C  C  ACP +A+
Sbjct: 33  PEYDPAQCIGCAACTMACPANAL 55



 Score = 26.2 bits (56), Expect = 8e-04
 Identities = 19/84 (22%), Positives = 28/84 (33%), Gaps = 28/84 (33%)

Query: 149 GLYEIDVNLCVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSD 208
           G  E D   C+ C  C  ACP  NA+   ++ +   +                       
Sbjct: 31  GKPEYDPAQCIGCAACTMACPA-NALTMANDLDNGTRTW--------------------- 68

Query: 209 VIAEIPRIVPSLCIGCGNCVDVCP 232
                 ++    CI CG C +VCP
Sbjct: 69  ------QLFLGRCIFCGRCEEVCP 86