Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 302 a.a., formate dehydrogenase subunit beta from Dickeya dadantii 3937

 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 50/199 (25%), Positives = 69/199 (34%), Gaps = 79/199 (39%)

Query: 122 LIDEEVCVSCGTCENACPV-----DAISHNNTGLYEIDVNL------------------- 157
           LID   C+ C  C+ AC       D + HN  G+Y+   +L                   
Sbjct: 33  LIDVTTCIGCKACQAACSEWNDIRDEVGHN-VGVYDNPADLSAKSWTVMRFSEVESEDRL 91

Query: 158 --------CVSCKN--CLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKS 207
                   C+ C    CLKACP   AI+ Y+             + F  E          
Sbjct: 92  EWLIRKDGCMHCAEPGCLKACPSAGAIIQYANGI----------VDFQSEH--------- 132

Query: 208 DVIAEIPRIVPSLCIGCGNCVDVCPGSI------DLERLKVTSCI------KSGKCLEVC 255
                        CIGCG C+  CP +I      D    K T C+      +   C++ C
Sbjct: 133 -------------CIGCGYCIAGCPFNIPRLNKQDNRVYKCTLCVDRVSTGQEPACVKTC 179

Query: 256 PTTAIRIGVPEKITKRTAE 274
           PT AI  G  E++ +  AE
Sbjct: 180 PTGAIHFGTKEEMKQLAAE 198



 Score = 35.4 bits (80), Expect = 2e-06
 Identities = 42/185 (22%), Positives = 69/185 (37%), Gaps = 54/185 (29%)

Query: 24  KSEKESFIPPERFR----KIPVIFDLPEKCISCSACKESC-------------------P 60
           +S   S  PP + R    ++  + D+   CI C AC+ +C                   P
Sbjct: 11  RSATSSLTPPPQVRDDKSEVAKLIDVTT-CIGCKACQAACSEWNDIRDEVGHNVGVYDNP 69

Query: 61  SDAIS-----MEFNE---EFKKEMPVFDAGSCINCGN--CVESCPTNVLEMGTLRKEAKE 110
           +D  +     M F+E   E + E  +   G C++C    C+++CP+           A  
Sbjct: 70  ADLSAKSWTVMRFSEVESEDRLEWLIRKDG-CMHCAEPGCLKACPS-----------AGA 117

Query: 111 LLWNVPKIINLLIDEEVCVSCGTCENACPVDAISHNNTGLYEIDVNLCVSCKN------C 164
           ++     I++     E C+ CG C   CP +    N          LCV   +      C
Sbjct: 118 IIQYANGIVDF--QSEHCIGCGYCIAGCPFNIPRLNKQDNRVYKCTLCVDRVSTGQEPAC 175

Query: 165 LKACP 169
           +K CP
Sbjct: 176 VKTCP 180



 Score = 35.0 bits (79), Expect = 3e-06
 Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 14/97 (14%)

Query: 49  CISCS--ACKESCPSDAISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTLRK 106
           C+ C+   C ++CPS    +++          F +  CI CG C+  CP N+  +     
Sbjct: 100 CMHCAEPGCLKACPSAGAIIQYANGIVD----FQSEHCIGCGYCIAGCPFNIPRLNKQDN 155

Query: 107 EAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAI 143
              +          L +D         C   CP  AI
Sbjct: 156 RVYK--------CTLCVDRVSTGQEPACVKTCPTGAI 184



 Score = 34.7 bits (78), Expect = 4e-06
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 47  EKCISCSACKESCPSDA--ISMEFNEEFKKEMPVFDAGSCINCGNCVESCPTNVLEMGTL 104
           E CI C  C   CP +   ++ + N  +K  + V D  S      CV++CPT  +  GT 
Sbjct: 131 EHCIGCGYCIAGCPFNIPRLNKQDNRVYKCTLCV-DRVSTGQEPACVKTCPTGAIHFGT- 188

Query: 105 RKEAKEL 111
           ++E K+L
Sbjct: 189 KEEMKQL 195



 Score = 30.0 bits (66), Expect = 9e-05
 Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 9/121 (7%)

Query: 211 AEIPRIVP-SLCIGCGNCVDVCPGSIDL--ERLKVTSCIKSGKCLEVCPTTAIRIGVPEK 267
           +E+ +++  + CIGC  C   C    D+  E         +   L     T +R    E 
Sbjct: 28  SEVAKLIDVTTCIGCKACQAACSEWNDIRDEVGHNVGVYDNPADLSAKSWTVMRFSEVES 87

Query: 268 ITKRTAECYIVDEEKCIGCRI--CYRSCNVPEAILISKETNLPYINPEYCVRCGLCQNAC 325
             +     +++ ++ C+ C    C ++C    AI I     +     E+C+ CG C   C
Sbjct: 88  EDRLE---WLIRKDGCMHCAEPGCLKACPSAGAI-IQYANGIVDFQSEHCIGCGYCIAGC 143

Query: 326 P 326
           P
Sbjct: 144 P 144