Pairwise Alignments

Query, 393 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 180 a.a., NADH-quinone oxidoreductase subunit I from Acinetobacter radioresistens SK82

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 11/106 (10%)

Query: 4   SIWYLYEFV-RKKWFMRFTNAKSEKESFIPPERFRKIPVIFDLP---EKCISCSACKESC 59
           ++W ++  V RK+  + +    +E+   I P R+R   ++   P   E+C++C+ C  +C
Sbjct: 14  TLWMVFTHVGRKRDTILYPEVPAEQ---IVPPRYRGRIILTRDPDGEERCVACNLCAVAC 70

Query: 60  PSDAISMEFNE-EFKKEMPVF---DAGSCINCGNCVESCPTNVLEM 101
           P   IS++  E E  +  P F   +   CI CG C E+CPT  +++
Sbjct: 71  PVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQL 116



 Score = 43.1 bits (100), Expect = 6e-09
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 12/84 (14%)

Query: 125 EEVCVSCGTCENACPVDAISHNNT---------GLYEIDVNLCVSCKNCLKACPVENAIV 175
           EE CV+C  C  ACPV  IS               + I+ + C+ C  C +ACP   AI 
Sbjct: 57  EERCVACNLCAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPT-TAIQ 115

Query: 176 TYSEPELSEKIEIAQNIKFDRERL 199
              + EL E +   Q++ +++E L
Sbjct: 116 LTPDFELGEYVR--QDLVYEKEHL 137



 Score = 40.8 bits (94), Expect = 3e-08
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 280 EEKCIGCRICYRSCNVPEAILISKETNLPYINPEY-------CVRCGLCQNACPVDAI 330
           EE+C+ C +C  +C V    L   E       PE+       C+ CG+C+ ACP  AI
Sbjct: 57  EERCVACNLCAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAI 114



 Score = 38.9 bits (89), Expect = 1e-07
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 5/60 (8%)

Query: 84  CINCGNCVESCPTNVLEMGTLRKEAKELLWNVPKIINLLIDEEVCVSCGTCENACPVDAI 143
           C+ C  C  +CP   +   +L+K  KE     P+     I+   C+ CG CE ACP  AI
Sbjct: 60  CVACNLCAVACPVGCI---SLQKAEKEDGRWYPEFFR--INFSRCIFCGMCEEACPTTAI 114



 Score = 37.7 bits (86), Expect = 2e-07
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 15/57 (26%)

Query: 221 CIGCGNCVDVCP-GSIDLE--------------RLKVTSCIKSGKCLEVCPTTAIRI 262
           C+ C  C   CP G I L+              R+  + CI  G C E CPTTAI++
Sbjct: 60  CVACNLCAVACPVGCISLQKAEKEDGRWYPEFFRINFSRCIFCGMCEEACPTTAIQL 116



 Score = 31.2 bits (69), Expect = 2e-05
 Identities = 15/39 (38%), Positives = 17/39 (43%)

Query: 313 EYCVRCGLCQNACPVDAIDYLKTETSEDLYSKRKIRDEF 351
           E CV C LC  ACPV  I   K E  +  +     R  F
Sbjct: 58  ERCVACNLCAVACPVGCISLQKAEKEDGRWYPEFFRINF 96



 Score = 30.0 bits (66), Expect = 5e-05
 Identities = 22/75 (29%), Positives = 26/75 (34%), Gaps = 24/75 (32%)

Query: 158 CVSCKNCLKACPVENAIVTYSEPELSEKIEIAQNIKFDRERLGSEFKEKSDVIAEIPRIV 217
           CV+C  C  ACPV    +  +E                        KE      E  RI 
Sbjct: 60  CVACNLCAVACPVGCISLQKAE------------------------KEDGRWYPEFFRIN 95

Query: 218 PSLCIGCGNCVDVCP 232
            S CI CG C + CP
Sbjct: 96  FSRCIFCGMCEEACP 110