Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

 Score =  227 bits (579), Expect = 4e-64
 Identities = 137/368 (37%), Positives = 209/368 (56%), Gaps = 9/368 (2%)

Query: 4   VPIGPIHPILKEPLRIKLLVEGENVKGAEIDMGYVHRGIERIMEGKHYLKCIHLSERVCG 63
           + IGP+H  + EP R++L +E E VK AE+ +G  HRG+ER+MEG    K   L E++CG
Sbjct: 6   IAIGPVHSTMLEPHRLRLFIEDEIVKDAELTIGVNHRGVERLMEGLPVEKACILCEKICG 65

Query: 64  ICSYIHTQSFAECIENMCDIEVPEKAKYLRVITCELERIHSHLIAAAVYNLTIEHETLGI 123
           ICS+IH  S A  +E  C+IE+PE+A ++R+I  ELER+HSH +        + HET+ +
Sbjct: 66  ICSHIHLWSAARLVEIGCNIEIPERANHIRIIVEELERLHSHTLLFGHAFEILGHETMSM 125

Query: 124 WMLNVRESIMDLLELITGNRVNMGFNVVGGV--RLDLNKEILDKIHKKIDEFEEDVKNII 181
               +RE IM +   I+G+RV+    ++GG+  R ++++  +  I  KI ++EE +   +
Sbjct: 126 RCFMLREPIMQVFFEISGSRVHYSCPIIGGIRPRCNISETQIPHILDKISKYEEGLNKFL 185

Query: 182 EVFETGPLIGMRSKHIGKIGYKEIMKTRAAGPVARASGIPESDWRIRH--ETYKALNFKP 239
           E     P+I  R K +G +  K   K  A GP AR S + +SD R       Y   +F  
Sbjct: 186 ERMLNDPMIISRVKDVGVMDRKTAAKFHAVGPTARGSNV-KSDMRKWGWVPEYDPYDFDE 244

Query: 240 DWRNEGDNYARMMVRHDEVLTSVELIRRALEHYAESSG--IVRNKAEIRATEG-EWYNEA 296
              + GD +AR+ VR  E L SV++IR+AL+   ++S   I     E+   +    Y EA
Sbjct: 245 ILFDSGDVFARLAVRFYECLESVKIIRQALDALKDTSDKRIYNPNYELHEFKPINCYTEA 304

Query: 297 HRGEVYYKIAITDGGLIKRIIIRTPTVMNLEAYKYMIKDCPTIADAVATYTSIDPCVSCT 356
            RGE YY   + D GL+++  IRTPT  NL A + ++K    ++DA     S DPC +CT
Sbjct: 305 QRGEQYYSYGLDDEGLVRQAKIRTPTATNLGAMEDIVKGY-HVSDAELIIASCDPCFTCT 363

Query: 357 ERTIQLKD 364
           +R + LK+
Sbjct: 364 DRLMVLKE 371