Pairwise Alignments

Query, 375 a.a., nickel-dependent hydrogenase large subunit from Methanococcus maripaludis S2

Subject, 599 a.a., NADH-quinone oxidoreductase subunit C/D from Dickeya dianthicola ME23

 Score =  107 bits (266), Expect = 1e-27
 Identities = 90/382 (23%), Positives = 173/382 (45%), Gaps = 30/382 (7%)

Query: 6   IGPIHPILKEPLRIKLLVEGENVKGAEIDMGYVHRGIERIMEGKHYLKCIHLSERVCGIC 65
           +GP HP      RI L + GE +     D+GY HRG E++ E + +   I  ++R+  + 
Sbjct: 219 LGPNHPSAHGAFRIILQLNGEEIVDCIPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLG 278

Query: 66  SYIHTQSFAECIENMCDIEVPEKAKYLRVITCELERIHSHLIAAAVYNLTIEHETLGIWM 125
             ++   +   +E +  IEVPE+ K +RV+  EL RI+SHL+  + +   +   T   + 
Sbjct: 279 GCVNEMPYVLAVEKLAGIEVPERVKVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFA 338

Query: 126 LNVRESIMDLLELITGNRVNMGFNVVGGVRLDLNKEILDKIHKKIDEFEEDVKNIIEVFE 185
              R+ I DL+E ITG R++  +  +GGV  DL +     + + ++     +   ++   
Sbjct: 339 FTDRQKIYDLVEAITGYRMHPAWFRIGGVAHDLPRGWERLLREFLEWMPARLDTYVKAAL 398

Query: 186 TGPLIGMRSKHIGKIGYKEIMKTRAAGPVARASGIPESDWRIR-HETYKALNFK-PDWRN 243
              ++  RS+ +     K+ ++    G   RA+GI     + R +  Y+  +F+ P    
Sbjct: 399 QNSILKGRSQGVAAYNAKDALEWGVTGAGLRATGIAFDVRKSRPYSGYENFDFEIPVGDG 458

Query: 244 EGDNYARMMVRHDEVLTSVELIRRALEHYAES---------------------SGIVRNK 282
             D Y+R+M++ +E+  S+ ++ + L++  E                        ++ + 
Sbjct: 459 VSDCYSRVMLKVEELRQSLRILEQCLKNMPEGPFKADHPLTTPPPKERTLQHIETLINHF 518

Query: 283 AEIR------ATEGEWYNEAHRGEVYYKIAITDGGLIKRIIIRTPTVMNLEAYKYMIKDC 336
            ++       A E     EA +G   Y +      +  R  IRTP+  +L+    +I+ C
Sbjct: 519 LQVSWGPVMPANESFQMVEATKGVNSYYLTSDGSTMSYRTRIRTPSFPHLQQIPAVIRGC 578

Query: 337 PTIADAVATYTSIDPCVSCTER 358
             ++D +    SID  +S  +R
Sbjct: 579 -LVSDLIVYLGSIDFVMSDVDR 599