Pairwise Alignments

Query, 156 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 288 a.a., F420-non-reducing hydrogenase subunit from Methanococcus maripaludis S2

 Score = 49.3 bits (116), Expect = 5e-11
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 48/178 (26%)

Query: 11  INVCLVNTGGCNGCDIEIVSC------LAPRYDIEQYGIYVH-NNPREADVLVVTGPVTG 63
           + V ++   GC+GC I ++        + P  +I    I        + DV +V G V  
Sbjct: 5   VKVGIIQLCGCSGCHISLLDLHEGLLDVLPALEIVYAPIIADVKEIPDVDVFLVEGGVRS 64

Query: 64  AWEKRLL-EIYEKTPEPKIVIAVGACALSGGIFKEGHIHGP------------------- 103
             ++ L+ EI EK+   K+VIA G+CA  GGI   G+++ P                   
Sbjct: 65  EHDEHLIHEIREKS---KVVIAWGSCAAFGGIPGLGNMYTPEQLKETVYTTVSTDNPGVI 121

Query: 104 --------------VDKVIPVDAKLPGCPPRPSEIISAVVSIAPDALAAKEKLLNQKL 147
                         +  V+  D  +PGCPP+P+    A+V++    L  K+ +L  K+
Sbjct: 122 PTEGVPELTTEVRAISDVVKADYVIPGCPPKPALTAGAIVAL----LEGKDPVLPTKI 175