Pairwise Alignments

Query, 156 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 178 a.a., NADH-quinone oxidoreductase subunit NuoB from Magnetospirillum magneticum AMB-1

 Score =  115 bits (287), Expect = 5e-31
 Identities = 54/124 (43%), Positives = 82/124 (66%), Gaps = 1/124 (0%)

Query: 9   RSINVCLVNTGGCNGCDIEIVSCLAPRYDIEQYGIYVHNNPREADVLVVTGPVTGAWEKR 68
           RS+++  V+ G CNGC++EI +   P YD+E++GI    +PR ADVL+VTGPVT   E+ 
Sbjct: 48  RSLSIREVDAGSCNGCELEIHAVNHPIYDLERFGIRFVASPRHADVLLVTGPVTRNMEEA 107

Query: 69  LLEIYEKTPEPKIVIAVGACALSGGIFKEGH-IHGPVDKVIPVDAKLPGCPPRPSEIISA 127
           L    E TPEP+ ++A+G C   GG F   + + G V  V+PVD  +PGCPP P +I++ 
Sbjct: 108 LRRTVEATPEPRWIVAMGDCGKDGGCFAGSYAVVGGVSDVVPVDLHIPGCPPSPRQILAG 167

Query: 128 VVSI 131
           ++++
Sbjct: 168 LLAL 171