Pairwise Alignments

Query, 156 a.a., NADH-quinone oxidoreductase subunit B family protein from Methanococcus maripaludis S2

Subject, 201 a.a., NADH ubiqionone oxidoreductase chain B from Agrobacterium fabrum C58

 Score = 85.9 bits (211), Expect = 3e-22
 Identities = 38/108 (35%), Positives = 68/108 (62%), Gaps = 2/108 (1%)

Query: 24  CDIE-IVSCLAPRYDIEQYGIYVHNNPREADVLVVTGPVTGAWEKRLLEIYEKTPEPKIV 82
           C +E ++    PRYD+E++G+    +PR++DV++V G +T      L ++Y++ PEP+ V
Sbjct: 80  CAVEGLMQASGPRYDMERFGVAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYV 139

Query: 83  IAVGACALSGGIFKEGH-IHGPVDKVIPVDAKLPGCPPRPSEIISAVV 129
           I++G+CA  GG +   + +    D+V+PVD  +PGCPP    ++  V+
Sbjct: 140 ISMGSCANGGGYYHYSYAVVRGCDRVVPVDIYVPGCPPTAEALLYGVL 187