Pairwise Alignments

Query, 286 a.a., NADH-quinone oxidoreductase subunit H from Methanococcus maripaludis S2

Subject, 339 a.a., NADH-quinone oxidoreductase subunit H from Xanthobacter sp. DMC5

 Score = 57.4 bits (137), Expect = 4e-13
 Identities = 66/288 (22%), Positives = 128/288 (44%), Gaps = 32/288 (11%)

Query: 5   LMYALYAFLVGGILLGFHRKLMARVQCRPGPPII------QYLIHTFKFYFKELTFPISA 58
           L+ AL  F+    +L   RK+ A VQ R GP ++      Q      KF  KE T P  A
Sbjct: 20  LLVALLIFIA--FILLADRKIWAAVQLRRGPNVVGPFGLLQSFADLLKFVLKEPTIPSGA 77

Query: 59  GNPLYVFVALMDVMVWMSALSIAVVFESSLLI-----LIGLYILQKIVEHGC---GLSSG 110
              +++   L+  ++ ++A ++  +    ++      ++ ++ +  +  +G    G +S 
Sbjct: 78  NKAIFLLAPLVTCVLALAAWAVVPIAPGWVIADLNVGVLYIFAISSLGVYGIIMGGWASN 137

Query: 111 SPYGKVGGVRSVFSAAA-EIPLFAAAGIVYTVTHSLIIGDIINYQAVNGPLIFQ----LP 165
           S Y  +  +RS     + E+ +      V     SL + +I+  +A NG   F     LP
Sbjct: 138 SKYPFLAALRSAAQMVSYEVSIGFVIITVLMCAGSLNLSEIV--EAQNGRFGFLGWYWLP 195

Query: 166 ICAFAV--FVLVLSKAPFSPFAIVKGK-DIISGYLTEHYGPLEAIIMIGDAIAWFVLLWL 222
           +    V  FV  L++    PF +V+ + ++++G++TE+      + M+G+ +A   +  +
Sbjct: 196 LLPMFVIFFVSALAETNRPPFDLVEAESELVAGFMTEYGSTPYLLFMLGEYVAIMTMCAM 255

Query: 223 FMALFLGPLIVASPVLTL-----LGMFVLTI-IISFICALTPLLAPNH 264
              LFLG  +   P         L  FVL +  + F+ A+   + P +
Sbjct: 256 GTILFLGGWLSPIPFAPFTWVPGLVWFVLKLCFMFFLFAMAKAMVPRY 303