Pairwise Alignments

Query, 369 a.a., GTP-binding protein from Methanococcus maripaludis S2

Subject, 366 a.a., GTP-binding protein from Pseudomonas simiae WCS417

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 90/369 (24%), Positives = 146/369 (39%), Gaps = 91/369 (24%)

Query: 68  VGFPSVGKSTLLNKLTNANSEVGAYAFTTLTIIPGLMEHKGAKIQVL------------- 114
           VG P+VGKSTL N LT +      + F T+    G++     ++  L             
Sbjct: 8   VGLPNVGKSTLFNALTKSGIAAENFPFCTIEPNSGIVPMPDPRLDALAAIVNPKRILPTT 67

Query: 115 ----DAPGIISGASFGRGRGSEVLAAVRNVDLVMLVVDVFSPEH-------------IPI 157
               D  G+++GAS G G G++ LA +R  D +  VV  F  E+             I I
Sbjct: 68  MEFVDIAGLVAGASKGEGLGNKFLANIRETDAIAHVVRCFEDENVIHVSNSVDPKRDIEI 127

Query: 158 LEKELGNVGIRLDQ-EKPDVKIEKHDRGGLAINKTVNLTKIDEGTITAIVGEHRIHNAAI 216
           ++ EL  +   LD  EK   K+ ++ +GG   +K      + +G +  ++    +   A 
Sbjct: 128 IDLEL--IFADLDSCEKQLQKVARNAKGG---DKD---AVVQKGLLEQLIAHFTLGKPAR 179

Query: 217 LIREDIDADQ-----------------LIDVVLDSRSYIPTLVIVNKIDLADEEN----- 254
            + + + AD+                 + +V  D     P L +V  I  ADEE      
Sbjct: 180 SLMKTMGADEKAVIKGFHLLTTKPVMYIANVAEDGFENNPLLDVVKAI--ADEEGAIVVP 237

Query: 255 -LKKTEAAI-----GDRPHVFVS--GHKEINLEELKDKIFETLGFIKLYLKPQGGKADLE 306
              K EA I     G+   +F+   G +E  L  +    +E L     +       A +E
Sbjct: 238 VCNKIEAEIAELDDGEEKDMFLEALGLEEPGLNRVIRAGYEMLNLQTYF------TAGVE 291

Query: 307 E--PLIILKNSTVEDVCNRLHRDFVKNFRYALV---------WGES-AKHPG--QRVGLD 352
           E     +   +T       +H DF K F  A V          GE+ AK  G  +  G +
Sbjct: 292 EVRAWTVKVGATAPQAAGVIHTDFEKGFIRAEVIAYNDFIQFKGEAGAKEAGKWRLEGKE 351

Query: 353 HVLKDGDIL 361
           +++KDGD++
Sbjct: 352 YIVKDGDVM 360