Pairwise Alignments

Query, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

Subject, 228 a.a., 30S ribosomal protein S3 from Pseudomonas simiae WCS417

 Score = 97.1 bits (240), Expect = 2e-25
 Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 4/184 (2%)

Query: 4   RTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKE 63
           RT+     ++  + EY + KL  A  S ID  +     RIT+   +PG VIG+KG+ V++
Sbjct: 27  RTYADYLFADLKVREYLQDKLKSASVSRIDIHRPAQTARITIHTARPGIVIGKKGEDVEK 86

Query: 64  LTETLATEYSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSG 123
           L + L  +  V    I ++++  P+LD  +V   +A  LER + FR+    A++  M  G
Sbjct: 87  LRQDLTKQMGVP-VHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAVQNAMRIG 145

Query: 124 AKGVAIIVSGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIM 182
           AKG+ I VSG+L G E +RTE + +G +        A ++ ++  A    G++GV V I 
Sbjct: 146 AKGIKIQVSGRLGGAEIARTEWYREGRVPL--HTLRADIDYANYEAHTTYGVIGVKVWIF 203

Query: 183 RPDV 186
           + +V
Sbjct: 204 KGEV 207