Pairwise Alignments

Query, 211 a.a., 30S ribosomal protein S3 from Methanococcus maripaludis S2

Subject, 303 a.a., SSU ribosomal protein S3p (S3e) from Variovorax sp. SCN45

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 4/184 (2%)

Query: 3   ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
           +R F G    +  + EY K KL  A  S +  ++     RIT+++ +PG VIG+KG+ ++
Sbjct: 26  DRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERPAKNARITIYSARPGVVIGKKGEDIE 85

Query: 63  ELTETLATEYSVKNPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGS 122
            L   L  +  V    + +++V  P++D  ++   I   LE+ + FR+    A++  M  
Sbjct: 86  NLKRELGKQLGVP-VAVNIEEVRKPEIDAQLIADSITQQLEKRIMFRRAMKRAMQNAMRL 144

Query: 123 GAKGVAIIVSGKLSG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKI 181
           GA G+ I+ +G+L+G E +RTE + +G +        A ++     AK   G++GV V +
Sbjct: 145 GALGIKIMSAGRLNGIEIARTEWYREGRVPL--HTLRADIDYGTSEAKTTYGVIGVKVWV 202

Query: 182 MRPD 185
            + D
Sbjct: 203 YKGD 206