Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1150 a.a., Chromosome partition protein Smc from Xanthobacter sp. DMC5

 Score =  197 bits (500), Expect = 5e-54
 Identities = 255/1247 (20%), Positives = 515/1247 (41%), Gaps = 176/1247 (14%)

Query: 7    IHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQLI 65
            + +  FK+F + + L I  G T ++GPNG GKSN ++ + +V+G++S K++RA     +I
Sbjct: 6    LRLVGFKTFVEPTDLLIEPGLTGVVGPNGCGKSNLVEALRWVMGESSYKAMRANDMEDVI 65

Query: 66   TYHNGKR--ENFAEVTLIFDNKDRKMPV---DSDKVGISRKVKINGDNNYYLIWNEEKEV 120
                  R   N AEV L  DN DR  P    + D++ I R+++    ++Y +        
Sbjct: 66   FSGTTGRPSRNSAEVVLHLDNSDRTAPAAFNEWDQLEIVRRIERGAGSSYRI-------- 117

Query: 121  KENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIID 180
              NG          K V+  ++  +    S  A    ++ QG + +I+   PN RR+I++
Sbjct: 118  --NG----------KDVRARDVQLIFADASTGARSPALVRQGQIGEIVGAKPNARRRILE 165

Query: 181  EISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240
            E +GVA    +  +A+  L+ A + + +++  I ++   ++ L+++      +  L  E+
Sbjct: 166  EAAGVAGLHARRHEAETRLKAAEQNLLRLEDVITQLGTQVDSLRRQSRQTVRYKSLAAEI 225

Query: 241  KATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNLINE 300
            +  +  L   + + +   L   ++ +EA K        E +   A++  ++    + +  
Sbjct: 226  RQCEATLLWLRWQDVTKALADAEQAVEAAKRDGA----EHTRLQAEAARLQALAAHALPA 281

Query: 301  LNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQKIET 360
            L +K  E    L + +      +D ++  L    ++L+          + LV+  Q  +T
Sbjct: 282  LRQKEAEAAAALQR-LTHARQELDAEEARLAARKEELE----------RRLVQLAQ--DT 328

Query: 361  IRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERINESQNE 420
             R E L  +AE     + +E L  E + L+ + EE+  +  I    + + +  + E++  
Sbjct: 329  AREEALSHDAE-----SVLERLAAEAENLRFEQEEAAEREAIAADMQEEAAAFLEEAERA 383

Query: 421  LYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKSLYKELEDVAVEL 480
            L            E      +L   + ++E L +E  +        + +    E  +VE 
Sbjct: 384  L-----------EEKTAHFADLGARRASLEQLLRETRD--------RLVRNAAERASVEA 424

Query: 481  EYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLDRAV-----KSVLE 535
            E          E++ + Q   D      ++  A   A+ + E+ S+D  V     +  +E
Sbjct: 425  E----------ESRLKQQAGTDALEGLRMEAEAARDALAEAEEASIDAEVAHTVARRAIE 474

Query: 536  AKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYLKKNNLGRTTF 595
               P + +     G+ + E +T  +    +   +  V  +   A+  +      LG    
Sbjct: 475  ELRPTLAEAQARFGRLETEARTLAKVLQSSDARFPPVADLVTVAKGYETALGAALGDDLD 534

Query: 596  LPLDRINGPEALYLDDEGVVGRAIDLVE--FKPEHENLFRYVFGNTIIVENLDYAKTLSK 653
            LP+D      A +       G A+D  +       E L R+V G   +   L     +++
Sbjct: 535  LPVD--GAAPARW------AGAALDPSDPPLPQGAEPLSRFVSGAPALARRLAQVGIVAR 586

Query: 654  -DHRA---------RFVTLEGEVIEPSGAMIGGRSRKKSVIKVDIDTSKLEKLAEDISEL 703
             D  A         R V++EG++    G           V   D  T+   +LAE     
Sbjct: 587  ADGPALASRLKAGQRLVSMEGDLWRWDGV----------VAAADAPTAAARRLAE----- 631

Query: 704  DGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIKELELES 763
                          +N+ A         E+ L  ++     +EG+L     + + L  E+
Sbjct: 632  --------------RNRLADIEAEAALAEAHLDEVRATLADREGVL-RQAAEGENLAREA 676

Query: 764  RK-LEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFEN--SEHSKRIKVI 820
            R+  +   +    + E  ER+  +   ++S     R+R++   A  E   ++  +++  +
Sbjct: 677  RRAAQRSAEASRATLEAAERRAAQHLARLSALAEARNRLAAVRAESEAALADAERQLAAL 736

Query: 821  D-ENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNSNIKELSEKRTILEQNIQFYKN 879
            D   ++  E  +   +   +R AV        ++  L  +  +   +   +    + ++ 
Sbjct: 737  DTPQVLESELARARADTAERRAAVAEARA---RLDALRRDATQRMRRLEAIAAEERSWRQ 793

Query: 880  NVEKNFEILKNKKERYEDLTKDLRELTE-------KKEAFEKELEILNGEKRRVYGRINQ 932
                  E L     R  +   +L E+ E       ++ A    LE     +R    R+ +
Sbjct: 794  RAGGAGERLAAVAAREAEAKTELAEIEEAPSEFIRRRRALMNALEEAEAARREAADRLAE 853

Query: 933  NESQI--------------NSLSIDKAKYETRLE-----EEDRKLYVCE------NIEQI 967
             E  +              +    + A+ + RLE      +D +  + +      ++ + 
Sbjct: 854  GEEALAAADRAARDALEAMSGARAEAARADARLEGARQRRDDLQREIADILDGPPDLARE 913

Query: 968  SEDITSKIKEFDVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYEN 1027
               +T      +V A+E+     +   ++L  VN+RA  + +    ++  L  +R D   
Sbjct: 914  QAGLTDSSPPPNVAAIEATLERAKRDRERLGAVNLRADVELEEAEAQHTRLTTERDDLNE 973

Query: 1028 EEKKYLHLIEEVSKRKKEVFMDVYLKVAENYEKIYTEI--GGSGKLSLENPEDPFSGGLL 1085
              ++    I+ +++  +E     +  V  ++ K++  +  GG  +L L + +DP   GL 
Sbjct: 974  AIRRLRAAIQSLNREARERLQASFAVVDGHFRKLFDTLFGGGEAQLVLTDADDPLEAGLD 1033

Query: 1086 IDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGE 1145
            I A P  KK Q+L ++SGGE++LTA+A +FA+   NPAP  VLDEVDA LD  N      
Sbjct: 1034 IIAKPPGKKPQTLMLLSGGEQALTAMALIFAVFLTNPAPICVLDEVDAPLDDANVERFCT 1093

Query: 1146 MIKNASK--DSQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
            +++  ++  D++F+ I+H    ++  + ++GV M E G+S+LV + +
Sbjct: 1094 LLEEMTRLTDTRFLTITHNPITMAHQNRLFGVTMAERGVSRLVSVDL 1140