Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1162 a.a., chromosome segregation protein SMC from Pseudomonas simiae WCS417

 Score =  257 bits (657), Expect = 3e-72
 Identities = 286/1237 (23%), Positives = 548/1237 (44%), Gaps = 143/1237 (11%)

Query: 7    IHMKNFKSFKN-SKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQLI 65
            I +  FKSF + + +  P    A++GPNG GKSN ID + +V+G++SAK+LR      +I
Sbjct: 6    IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMTDVI 65

Query: 66   TYHNGKRE--NFAEVTLIFDNKDRKMPVDSD---KVGISRKVKINGDNNYYLIWNEEKEV 120
               +  R+  + A + L+FDN D  +  +     ++ I RKV  +  N+Y+L        
Sbjct: 66   FNGSTSRKPVSQASIELVFDNSDGTLIGEYAAYAEISIRRKVTRDSQNSYFL-------- 117

Query: 121  KENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIID 180
              NG           K ++ +I D+     L    ++II QG + K+I+  P + R  I+
Sbjct: 118  --NGT----------KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRNFIE 165

Query: 181  EISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240
            E +G++++ E+  + +  + +  E + ++     E++  LE+L ++ + AE + +   E 
Sbjct: 166  EAAGISKYKERRRETENRIRRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKGEE 225

Query: 241  KATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNLINE 300
            +  K  L++ + + LN   ++  +    +   ++ F   ++E       I  RL++  ++
Sbjct: 226  RQLKAQLSALRWQALN---DQVGQREAIIGTQEISFEALVAEQRNADASIE-RLRDGHHD 281

Query: 301  LNEKGN---EEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQK 357
            L+E+ N        +   I  +E ++ + ++ L    DDLK             +ET   
Sbjct: 282  LSERFNLVQGRFYSVGGDIARVEQSIQHGQQRLRQLQDDLKEAERAR-------LETESH 334

Query: 358  IETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERINES 417
            +   RT  L    E++ L  E E      ++  + +EESET     ++Q    + +  E 
Sbjct: 335  LGHDRTLLLTLGEELDMLTPEQEITSAAAEEAAAALEESETTMHGWQEQWDTFNLKSAEP 394

Query: 418  QNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKSL-----YKE 472
            + +    ++    LE  + + +       E    LQ+E   + ++ ED   +       E
Sbjct: 395  RRQAEVQQSRIQQLETSMERLA-------ERQRRLQEERVLLAADPEDAAIMELSEQLAE 447

Query: 473  LEDVAVELEYSKKKVVTLLENKKEYQDRL----DKSHADYIKENAKIKAMKDMEDFSLDR 528
             E    ELE S+++ V  LE  ++   +      ++  D  + N ++ +++ ++  +LD 
Sbjct: 448  SEMTLEELEASEEQQVERLEQLRQQLQQATQAQQQAQGDLQRLNGRLASLEALQQAALDP 507

Query: 529  AVKS---VLEAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYL 585
               +   + +  L     +A  L K +A ++ A+E   G  L  ++V   D G   +   
Sbjct: 508  GTGTAEWLRDQHLAERPRLAEGL-KVEAGWELAVETVLGADLQAVLVD--DFGGFDLAGF 564

Query: 586  KKNNLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTIIVENL 645
             + +L         R+  P A   D   V G  +D VE   +         G    VE+L
Sbjct: 565  AQGDL---------RLLSPAA---DGTRVPGSLLDKVEAAIDLSPWL----GQVKPVESL 608

Query: 646  DYAKTLSKDHRARFVTLEGEVIEPSGAMIGG---RSRKKSVIKVDIDT--SKLEKLAEDI 700
            + A       R +    E  +I   G  +G    R R+ S  +  +     ++  L  + 
Sbjct: 609  EQALA----QRGQLAAGES-LISRDGYWVGRHFLRVRRASEAESGVLARGQEIVNLIAER 663

Query: 701  SELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIKELE 760
             E + TL   + E++ L+       T +  L   L+     + + +  L+ +  K+++L 
Sbjct: 664  EEREATLESLETELQTLRATQRQQETGREHLRRLLQDEARQQGELKAQLSASKAKVEQLT 723

Query: 761  LESRKLEEELDYLEGSKEELERK--------IEEFTKKISGFTSQR-------------- 798
            L   +L+EE+  + G +  LE +        ++E    ++  T QR              
Sbjct: 724  LRRTRLDEEVAEM-GEQRALEHEQIGEARLHLQEALDSMALDTEQRELLLAQRDSLRERL 782

Query: 799  DRISEEIASFENSEHSKRIKVIDENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNS 858
            DR+ +E    ++  H   ++      +   K ++    +      +  E L  K  +L+ 
Sbjct: 783  DRVRQEARQHKDHAHQLAVR------LGSLKAQHASTAQALERLEMQSERLTEKREQLSL 836

Query: 859  NIKE----LSEKRTILEQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEAFEK 914
            N++E    L E R  LE+ +   +  V+   E LK  +   ED  ++LR+  +++   E+
Sbjct: 837  NLEEGEAPLEELRLKLEELLD-KRMTVD---EELKTAQIALEDADRELRDAEKRRTQAEQ 892

Query: 915  ELEILNGEKRRVYGRINQNESQINSLSIDKAKYETRLEEEDRKLYVCENIEQISEDITSK 974
            + +++ G+       + Q   +  +L++ +   + +L E+   L+   N       +T++
Sbjct: 893  QSQLIRGQ-------LEQQRMEWQALTVRRKTLQDQLLEDGYDLHGVLNT------LTAQ 939

Query: 975  IKEFDVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLH 1034
              E +    E     +   I++L  +N+ AID+YQ   +R   L  +  D         +
Sbjct: 940  ANEKEA---EEELERIAARIQRLGAINLAAIDEYQQQSERKRYLDAQDADLVEALDTLEN 996

Query: 1035 LIEEVSKRKKEVFMDVYLKVAENYEKIYTEIGGSGKLSLE-NPEDPFSGGLLIDASPMNK 1093
            +I ++ K  +  F D + ++    + ++ ++ G G   LE   ED    G+ I A P  K
Sbjct: 997  VIRKIDKETRNRFKDTFDQINSGLQALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPGK 1056

Query: 1094 KLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASKD 1153
            K  ++ ++SGGEK+LTALA +FAI  LNPAPF +LDEVDA LD  N G    ++K  S+ 
Sbjct: 1057 KNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSQT 1116

Query: 1154 SQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
             QFI I+H +  +  +D + GV M E G S+LV + +
Sbjct: 1117 VQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDV 1153