Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1147 a.a., Chromosome partition protein smc from Sphingobium sp. HT1-2

 Score =  169 bits (427), Expect = 2e-45
 Identities = 250/1247 (20%), Positives = 510/1247 (40%), Gaps = 173/1247 (13%)

Query: 4    LSEIHMKNFKSFKNS-KLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFN 62
            +  + +  FKSF ++ +L+I  G T I+GPNG GKSN ++ I +V+G++SAKS+R G   
Sbjct: 3    IKRLKLSGFKSFVDATELRIEPGLTGIVGPNGCGKSNLLEAIRWVMGESSAKSMRGGGME 62

Query: 63   QLITYHNGKR--ENFAEVTLIFDNKDRKM----PVDSD-KVGISRKVKINGDNNYYLIWN 115
             +I      R   +FAEV+L+   +  ++     V +D ++ ++R+++    + Y     
Sbjct: 63   DVIFAGTTSRPQRDFAEVSLLTIQEQGELFNAVDVGADGELEVTRRIERGAGSAY----- 117

Query: 116  EEKEVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNER 175
                 + NG          K V+  ++  +    +  A    ++ QG +  +I   P ER
Sbjct: 118  -----RANG----------KDVRAKDVALIFADAATGAHSPALVSQGRIAAVIAARPQER 162

Query: 176  RKIIDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVK 235
            R +++E +G+A    + + A+++L  A   + ++D  + ++ +    L+++   AE +++
Sbjct: 163  RAMLEEAAGIAGLHVRRKDAEQKLRAAEGNLARLDEILADMDSRAGNLRRQARAAERYIR 222

Query: 236  LTEELKATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQ 295
            L+E+++  +  +   +    N   E  + E +  +       + ++  +A S        
Sbjct: 223  LSEQIRIAEGRVIFARWREANASAEAARAEAKLAEATVGAAQEALTAANAHSG------- 275

Query: 296  NLINELNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETR 355
              +  L E+   E +    +  E    ++  K   +G +  L ++  Q+ +    L E R
Sbjct: 276  AAVTALAER-RAEALATRDAASESGHQLNTLKAERDGVVRRLHDLAQQAAR----LDEDR 330

Query: 356  QKIETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERIN 415
            ++  T+  +  +  A + A          E   LK ++ E+E        +  +  +   
Sbjct: 331  EREGTLANDAAEAIARLTA----------EVASLKGRIAETEAMRPDFAARIARAEDGAR 380

Query: 416  ESQNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKSLYKELED 475
            +++ +L     +    + E+      LA  ++ +   ++ +  +  E             
Sbjct: 381  DAELDLAKAMAKQAGEQAELRVAEAALAAARDRLGRAEQAMRRLEGE------------- 427

Query: 476  VAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMK-DMEDFSLDRAVKSVL 534
                           L +    + + D++ A  ++ NA  +A +  +     +R V S  
Sbjct: 428  ------------AAALPDAAPLEAKRDEAAAAQVRANADREAAEAAIATAETERQVASEA 475

Query: 535  EAKLPGVVDIA-GNLGKTDAE---YKTAIENAGGNRLNYIVVKRMDDGARAIQYLK---- 586
             A     +  A   L   D+E    + AI+ +G  R            ARA+  LK    
Sbjct: 476  RASAEAALASARAALAALDSEATALRKAIDASGSGR------------ARALDQLKAAPG 523

Query: 587  -----KNNLGRTTFLPLD-----RINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVF 636
                    LG     P+      R  G EAL  DD G+   A  L       E L R + 
Sbjct: 524  YERALAAALGDDLEAPIGAEGPRRWAGAEAL-KDDPGLPDGASPLTAHVTAPEALARRLA 582

Query: 637  GNTIIVENLDYAKTLSKDHRARFVTLEGEVIEPSG--AMIGGRSRKKSVIKVDIDTSKLE 694
               ++  +   A  + +    R VTL+G++    G  A+ GG +  + +I+++       
Sbjct: 583  QVALVESDKGQALQVGQ----RLVTLDGQLRRWDGYVAVEGGAAAAERLIRIN------- 631

Query: 695  KLAEDISELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGV 754
                 +  +D T       ++  Q + A    R+      L   +          T  G 
Sbjct: 632  ----RLEAIDATRPAAAQAVDAAQAEQAEAGAREKAAVEALAAGR----------TKLGD 677

Query: 755  KIKELELESRKLEE---ELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASF-EN 810
              + L    R  +E    L+ L G +E +E ++ E  +      ++ D+ S   A+  + 
Sbjct: 678  ADQRLRAALRAADEAAGALERLSGKREAIEERLAEARRDQGAVQAEHDKASAARAALPDG 737

Query: 811  SEHSKRIKVIDENIIAFEKKKNEFENEIKRDAVLIKEVLI---PKISELNSNIKELSEKR 867
            +E   ++  + +   A EK +    ++++ D  L    L     +++  ++  K  + + 
Sbjct: 738  AETRAQVAALSQ---ASEKARMAV-SQLQADQALADRALSSDRERMAAADAEAKGWNTRA 793

Query: 868  TILEQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEA------------FEKE 915
                + I    +  E   +     + + E L   +  LTE++EA             E E
Sbjct: 794  GEAAKRIAAMASRGETVVQERAAIEGQPEALGTSIATLTEEREAQVERAEQARRAEIEAE 853

Query: 916  LEILNGEKRRV-YGRINQNESQINSLSIDKAKYETRLEEEDRKLYVCENIEQISEDITSK 974
              +   EKR    G       +  + ++ +A+       E  +L   E  E     +  K
Sbjct: 854  ATLKAAEKRAADAGEALAGAREARATAVARAEAADERRIETNRL-SGERFECPPPVLPEK 912

Query: 975  I--KEFDVDALESHQID---LEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEE 1029
            +     D+   +S Q +   L    +++ PVN+ A  + + +         +  +     
Sbjct: 913  LGFPSADIRTAQSEQAEHDRLSAERERIGPVNLVAAQELEELETIQATSRAESAELTQAI 972

Query: 1030 KKYLHLIEEVSKRKKEVFMDVYLKVAENYEKIYTEI--GGSGKLSLENPEDPFSGGLLID 1087
             +    I  +++  ++  +  +  V  ++ +++T +  GG   L L + +DP   GL I 
Sbjct: 973  NQLRGSIGSLNREGRQRLLAAFEAVDGHFRRLFTTLFNGGQAHLELIDSDDPLEAGLEIM 1032

Query: 1088 ASPMNKKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKN----AGLI 1143
            A P  KKL +L ++SGGE++LTA+A +F +   NPAP  VLDEVDA LD  N      L+
Sbjct: 1033 AQPPGKKLAALTLLSGGEQALTAVALIFGLFLTNPAPICVLDEVDAPLDDANVERFCDLL 1092

Query: 1144 GEMIKNASKDSQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
              M+  A   +++++++H    +++   ++GV M E G+S+LV + +
Sbjct: 1093 DAMV--AQTRTRYLIVTHNAVSMARMHRLFGVTMVERGVSRLVSVNL 1137