Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1162 a.a., Chromosome partition protein Smc from Pseudomonas putida KT2440

 Score =  249 bits (635), Expect = 1e-69
 Identities = 268/1245 (21%), Positives = 547/1245 (43%), Gaps = 159/1245 (12%)

Query: 7    IHMKNFKSFKN-SKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQLI 65
            I +  FKSF + + +  P    A++GPNG GKSN ID + +V+G++SAK+LR      +I
Sbjct: 6    IRLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMTDVI 65

Query: 66   TYHNGKRE--NFAEVTLIFDNKDRKMPVDSD---KVGISRKVKINGDNNYYLIWNEEKEV 120
               +  R+  + A + L+FDN +  +  +     ++ I RKV  +G N+YYL        
Sbjct: 66   FNGSSGRKPVSQASIELVFDNSETTLVGEYAAYAEISIRRKVTRDGQNSYYL-------- 117

Query: 121  KENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIID 180
              NG           K ++ +I D+     L    ++II QG + K+I+  P E R  I+
Sbjct: 118  --NGT----------KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEELRNFIE 165

Query: 181  EISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240
            E +G++++ E+  + +  + + +E + ++     E++  LE+L ++ + AE + +   + 
Sbjct: 166  EAAGISKYKERRRETENRIRRTQENLARLTDLREELERQLERLHRQAQAAEKYREYKAQE 225

Query: 241  KATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNLINE 300
            +  K  L++ +   L+   E+ ++    + +  V     ++E       I  RL++  +E
Sbjct: 226  RQLKARLSALRWRDLD---EQVRQRESVIGDQGVSHEALVAEQRNADASIE-RLRDGHHE 281

Query: 301  LNEKGNE---EIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQK 357
            L+E+ N+       +   I  +E ++ + ++ L    DD K          +  +ET   
Sbjct: 282  LSERFNQVQGRFYSVAGDIARVEQSIQHGQQRLRQLQDDFKEAE-------RTRLETESH 334

Query: 358  IETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERINES 417
            +   RT       E+  L+ E E      ++  + +EE+E      ++Q    + R  E 
Sbjct: 335  LGHDRTLLATLGEELAMLEPEQEMTLAAAEEAAAALEEAELGMHGWQEQWDSFNSRSAEP 394

Query: 418  QNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKSL-----YKE 472
            + +    +     LE  + +++       E    L +E E++ S+ +D   L        
Sbjct: 395  RRQAEVQQARLQQLETSLERQA-------ERQRKLVEEREQLGSDPQDAAMLELAEQLAS 447

Query: 473  LEDVAVELEYSKKKVVTLLENKKEYQDRL----DKSHADYIKENAKIKAMKDMEDFSLDR 528
             E +  EL+  +++V+  LE+ +E   +      ++  D  +   ++ +++ ++  +L+ 
Sbjct: 448  SEMLLEELQLCEEQVIERLESAREQLQQATQAQQQAQGDLQRLGGRLASLEALQQAALEP 507

Query: 529  AVKSVLEAKLPGVVD---IAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARA---- 581
               +       G+     +A  L + +  ++ A+E   G  L  ++V   +D   A    
Sbjct: 508  GAGAAQWLHGQGLEQQPRLAEGL-RVEPGWELAVETVLGADLQAVLVDDFNDLDFAGLEQ 566

Query: 582  --IQYLKKNNLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNT 639
              ++ L     G T          P +L    EG +  A  L + +P  +          
Sbjct: 567  GELRLLLAVGAGATL---------PGSLLEKVEGRIDLAPWLGQVRPVED---------- 607

Query: 640  IIVENLDYAKTLSKDHRARFVTLEGEVIEPSGAMI--GGRSRKKSVIKVDIDTSKLEKLA 697
             + + L+   +L +      V+ +G  +      +  GG +    + +      ++E+L 
Sbjct: 608  -LAQALEQRGSLGEGQS--LVSRDGYWVGRHFLRVRRGGEAEGGVLAR----GQEIERLG 660

Query: 698  EDISELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIK 757
            ++  E +  L +   +++ L+ +      ++ +L  R +    L  + +  L+ +  + +
Sbjct: 661  QEQLEQEAALEQLDQQLQALREQQLDLEEQREQLRRRTQDENRLHGELKASLSASRARAE 720

Query: 758  ELELESRKLEEELDYLEGSKE-------ELERKIEEFTKKISGFTSQR------------ 798
            ++EL  R+L+EEL  LE  +        E    ++E  + ++  T QR            
Sbjct: 721  QVELRRRRLQEELSELEEQRALEHEQLGEARLLLQEALELMAQDTEQREQLMARRDTLRE 780

Query: 799  --DRISEEIASFENSEHSKRIKV------IDENIIAFEKKKNEFENEIKRDAVL---IKE 847
              DR+ +E    ++  H   +++       D    A E+ + +     +R   L   ++E
Sbjct: 781  SLDRVRQEARQHKDHAHQLAVRLGSLRAQHDSTRQALERLEQQAARLTERQEQLSLNLEE 840

Query: 848  VLIPKISELNSNIKELSEKRTILEQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTE 907
               P+  EL   ++EL E+R  +++ ++  + +++              +  ++LR+  +
Sbjct: 841  GEAPQ-EELRLKLEELLERRMSVDEEMRLARLHMD--------------EADRELRDAEK 885

Query: 908  KKEAFEKELEILNGEKRRVYGRINQNESQINSLSIDKAKYETRLEEEDRKLY-VCENIEQ 966
            ++   E++ ++L G+       + Q   +   L + +   + +L  +   L  V   +E 
Sbjct: 886  RRTQAEQQAQLLRGQ-------LEQLRLECQGLDVRRKTLQEQLLADGYDLQGVLATLEA 938

Query: 967  ISEDITSKIKEFDVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYE 1026
                      E      E     LE  I++L  +N+ AI++Y+   +R   L  +  D  
Sbjct: 939  ----------EASEQGTEQELEQLEARIQRLGAINLAAIEEYEQQSERKRYLDAQDADLV 988

Query: 1027 NEEKKYLHLIEEVSKRKKEVFMDVYLKVAENYEKIYTEIGGSGKLSLE-NPEDPFSGGLL 1085
               +   ++I ++ K  +  F D + ++    + ++ ++ G G   LE   ED    G+ 
Sbjct: 989  EALETLENVIRKIDKETRNRFKDTFDQINAGLQALFPKVFGGGSAYLELTGEDLLDTGVT 1048

Query: 1086 IDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGE 1145
            I A P  KK  ++ ++SGGEK+LTALA +FAI  LNPAPF +LDEVDA LD  N G    
Sbjct: 1049 IMARPPGKKNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPLDDANVGRYAR 1108

Query: 1146 MIKNASKDSQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
            ++K  S+  QFI I+H +  +  +D + GV M E G S+LV + +
Sbjct: 1109 LVKEMSESVQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDV 1153