Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 993 a.a., AAA family ATPase from Methanococcus maripaludis S2

 Score =  156 bits (395), Expect = 7e-42
 Identities = 259/1190 (21%), Positives = 499/1190 (41%), Gaps = 239/1190 (20%)

Query: 4    LSEIHMKNFKSFKNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQ 63
            +  I M+NF+S +N+ +    G T+I+G NGSGKS+    + F L      + R     Q
Sbjct: 3    IKNIKMENFRSHRNTSINFSKGITSIIGQNGSGKSSIFQAMNFALFAPRGNNFRIENLMQ 62

Query: 64   LITYHNGKRENFAEVTLIFDNKDRKMPVDSDKVGISRKVKINGDNNYYLIWNEEKEVKEN 123
                       F  +   +  K ++    +D      K+ +NG              K N
Sbjct: 63   QGAASFSVELEFEMMGNTYLVKRKRFQHKTDD-----KLYVNG--------------KLN 103

Query: 124  GEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIIDEIS 183
             E  +   E  KK++  EIL++   +  +A     I QG++  +I  TP +R+++I ++ 
Sbjct: 104  AESAS---EINKKIE--EILEIDNSVFSNA---IYIKQGEIANLIQMTPRDRKEVIGKLL 155

Query: 184  GVAEFDEKGEK---AKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240
            G+ ++++  EK    KK  E+    +E    +  E+  NLEKLK E  ++E    L EE+
Sbjct: 156  GIEKYEKASEKMNIVKKSYEETLLKLEGELTQEPEILENLEKLKNEVSESEI---LKEEI 212

Query: 241  KATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNLINE 300
                                K  E +E LK  K   + ++ E  A++N ++  L+++I+E
Sbjct: 213  L-------------------KKYENLEKLKLEKNSEILQMEEKFAENNQLKENLKDIISE 253

Query: 301  LNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQKIET 360
                           IK + + + N K SLN   ++ KN+ S++E+  +  +E   KI+ 
Sbjct: 254  ---------------IKNINLEIQNFKNSLNLVAEESKNI-SENEENYKKYLELELKIKE 297

Query: 361  IRTETLQKEA---EINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERINES 417
            +  + +  ++     N LKT  E+L  E   LK  +++++   + LK+  ++  E+I   
Sbjct: 298  LNNKLIGHKSNYESYNKLKTIEESLLKELGVLKESLKDNKKNPDELKENLKENDEKI--- 354

Query: 418  QNELYNFKNEFNALENEINKKSFNLAKNKETIETL----------QKELEEIRSEHEDTK 467
               L   K +   LE  I K+ + +  +K+T+ETL           K  EE++++    +
Sbjct: 355  -LILDKIKEKIKELE-FIEKQIYEIKIHKKTVETLFDSVKIYDDSIKTFEELKTKKNSYE 412

Query: 468  SLYKELEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLD 527
            +L KE  D+       +KK    L+N+ + + +L     D+ K   KI    ++++   D
Sbjct: 413  NLLKEKFDL-------EKK----LQNETDEKTKLISELTDFEKIEEKINLENELKEKYED 461

Query: 528  RAVKSVLEAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYLKK 587
                  L  K+  + +I        +EYK +       + +  V +      +  + L+K
Sbjct: 462  ------LSEKIDKLNEIVLKKESKISEYKNSKAELEKTKDSCHVCQSKITEEKKQELLEK 515

Query: 588  NNLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTIIVENLDY 647
             N    + +  ++++  E+L    E ++ +  + ++ K    + F+  +G          
Sbjct: 516  YN----SEIQNEQLS-TESLKKQLEIILNKK-EKMKVKLNEIDSFKLKYGEL-------- 561

Query: 648  AKTLSKDHRARFVTLEGEVIEPSGAM--IGGRSRKKSVI--KVDIDTSKLEKLAEDISEL 703
                 K+ +   + +E  +IE +  +  + G+  + S +  ++ +  +KL+ L  D    
Sbjct: 562  -----KEKKNYSLKVEESIIETTEKLNELTGKINEYSSLNDEISLIENKLKNLENDYKNC 616

Query: 704  DGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIKELELES 763
            + +           +N  + + T+K+EL    KII D                     +S
Sbjct: 617  NYSSQFL------TKNDESEFLTKKLELS---KIIGD--------------------YDS 647

Query: 764  RKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFENSEHSKRIKVIDEN 823
             K+E E   LE  K+EL+  I    ++I+        + +E+ + +N + S +I ++ E 
Sbjct: 648  SKIENEKKSLENLKDELKNTIYNLEREIN--------LKKELKNIQN-DISSKIGIV-EC 697

Query: 824  IIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNSNIKELSEKRTILEQNIQFYKNNVEK 883
             + +E +K++FEN               K+SE   N ++  E   +L+   + Y   +  
Sbjct: 698  YVKWETEKSDFEN---------------KLSECKENYEKYMESLAVLKNYSKTYSVEINN 742

Query: 884  NFEILKNKKERYEDLTKDLRELTEKKEAFEKELEILNGEKRRVYGRINQN-ESQINSLSI 942
              E L  K             + EK++  EK LE     ++ +   +N N E   N+   
Sbjct: 743  LNEFLNQK-------------IAEKQQFCEKLLETRTEIEKNIQ-TVNYNPELHENA--- 785

Query: 943  DKAKYETRLEEEDRKLYVCENIEQISEDITSKIKEFDVDALESHQIDLEGHIKKLEPVNM 1002
             K  YE  L E +    +   +E+IS ++  K+K  ++  L     +L    KK E   +
Sbjct: 786  -KRLYENILNEFND---ILRTLERISSEL--KLKNENISYLNEKIQNLSN--KKEEKKKI 837

Query: 1003 RAIDDYQYIVDRYDELFEKRTDYENEEKKYLHLIEEVSKRKKEVFMDVYLKVAENYEKIY 1062
                +Y   + R  E+F K    +   +KY+ LI+   +   ++F        + +E  Y
Sbjct: 838  EEFKEYLDKIKR--EIFSKDGFQKYLREKYIPLIQ---RHTNQIF--------QEFELPY 884

Query: 1063 TEIGGSGKLSLENPEDPFSGGLLIDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQH--L 1120
            + I           +D +S  L++D  P       ++ +SGGE+   +LA    I     
Sbjct: 885  SHI---------QLKDDYS--LIVDGLP-------VETLSGGEQIAVSLALRLGISKAVC 926

Query: 1121 NPAPFYVLDEVDAALDTKNAGLIGEMIKNASKDSQFIVISHREQMISKSD 1170
            N     +LDE  A LD      +  + KN    +Q  +I+H +++   +D
Sbjct: 927  NNIECIILDEPTAYLDEDRRKNLLNIFKNIKTINQMAIITHHQELEQIAD 976