Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1184 a.a., chromosome segregation protein SMC, common bacterial type from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  324 bits (831), Expect = 2e-92
 Identities = 287/1236 (23%), Positives = 581/1236 (47%), Gaps = 121/1236 (9%)

Query: 4    LSEIHMKNFKSFKNS-KLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFN 62
            L+++ +K FKSF +   +    G T I+GPNG GKSN +D I +VLG+   + LR+ K  
Sbjct: 3    LTKLEIKGFKSFGDKVTIHFDKGITGIVGPNGCGKSNVVDAIRWVLGEQKTRMLRSDKME 62

Query: 63   QLITY--HNGKRENFAEVTLIFDNKDRKMPVDSDKVGISRKVKINGDNNYYLIWNEEKEV 120
             +I     N K  N AEV+L F+N    +P +   V I+R+   +GD+ Y L        
Sbjct: 63   NVIFNGTKNRKPTNMAEVSLTFENTKNLLPTEYTHVTITRRYYRSGDSEYLL-------- 114

Query: 121  KENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIID 180
              NG    +K+          I ++     + ++ + II    + ++++   N RR + +
Sbjct: 115  --NGIACRLKD----------INNLFMDTGIQSNSYAIIELKMIDELLNDKNNSRRDLFE 162

Query: 181  EISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240
            E +G+++F  + ++  K+L+     +++++  + E++ NL+ L+K+ + A  + ++ +  
Sbjct: 163  EAAGISKFKTRKKETLKKLDDTDADLDRVEDLLYEIEKNLKSLEKQAKQAAKYFEIKKSY 222

Query: 241  KATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRL---QNL 297
            KA+   L  K ++     L  T E+I A  + K+    EI+  +A+    ++ L   + L
Sbjct: 223  KASSIALAKKSVKTHTDNLINTNEKITAENDRKLQINNEITTKEAELEKFKSDLIHKEKL 282

Query: 298  INELNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGAL---DDLKNVNSQSEKKGQDLVET 354
            ++   +  NE + ++ +   E ++  +  +   + AL   + +      +++ G  +   
Sbjct: 283  LSTRQKTLNEHVNKIRQFESEKKIKNERLRFLEDRALKLREQIDQDRKSNDRAGFSIRSL 342

Query: 355  RQKIETIRTETLQKEAEINALKTEMEN------LETEKKKLKSKVEESETQTEILKQQER 408
             Q+ E       +KE  +  LK E E       ++ E++K+ SK   S   T        
Sbjct: 343  EQEKEVAEKLLAEKELTVQGLKEEYEEQKSAHAIQQERQKVLSKDYASRKDTIY------ 396

Query: 409  KLSERINESQNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKS 468
            +LS+ +   Q +L + K E     ++ + +  NLA  +E +  L+ EL+   ++ +  + 
Sbjct: 397  QLSKELEIKQIQLSSLKQELEKTASDDDSQEANLASFEERMVLLKDELD---AKTDQLQR 453

Query: 469  LYKELEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLDR 528
            L  + ED   ++E + + +  + E   +   +LD    ++   N     ++++E F    
Sbjct: 454  LKSQEEDQNQKIEDANRTIELIREEVTQLGRKLDAKQNEF---NLTKSLVENLEGFP--E 508

Query: 529  AVKSVLEAKLPGV-VDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYLKK 587
            A+K + +    G    +  ++  T   Y+ AIEN   + +NY VV+       A+  L  
Sbjct: 509  AIKFLKKKSSWGKDTPLLSDILTTSENYRVAIENYLESYMNYYVVETEAQAIAAVNLLSD 568

Query: 588  NNLGRTTFLPLDRING--PEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTIIVENL 645
               G+  F  L+      P    L    +   A +++EF  ++  L  Y+  +  IV   
Sbjct: 569  AARGKANFFVLEHFERFRPAQNKLFANAIA--ATEIIEFDEKYSKLISYILDDVYIVRG- 625

Query: 646  DYAKTLSKDHRARFVTLEGEVIEPSGAMIGGR---------SRKKSVIKVDIDTSKL-EK 695
                 + +D+ A F+T  G+  +   ++ GG           R K++ K++++  +L +K
Sbjct: 626  -EITDIPQDNDAIFITESGKFTKRKFSISGGSVGLFEGKRIGRAKNLEKLEVEIKELHKK 684

Query: 696  LAEDISELDGTLSET--------KDEIERLQNK----NATYSTRKMELESRLKIIKDLEH 743
            ++   S LD  +S+         K +IE LQ++    N  Y + K + E   +++    +
Sbjct: 685  VSAARSNLDKNVSDLMKLKEVSYKKDIENLQSEISEVNQQYISIKTKKEQLAEMLSTNAN 744

Query: 744  KKEGILTNNGVKIKELELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISE 803
            K+E IL        E++    KL+E  D  +G +EELE   +   ++      +    ++
Sbjct: 745  KREDILEKIESLSAEVDEIGPKLQEAKDGFDGMEEELEIMNDHLLQEEESLAVRSSNYNQ 804

Query: 804  EIASFENSEHSKRIKVIDENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNSNIKEL 863
            E  + +  +H  ++  +++ I     KK  FEN   +D +   E    ++S ++  IK L
Sbjct: 805  E--NIQYHQHLNKVNSLEQEI---SFKKTAFENS--KDRI---EKSQGELSSIDQEIKGL 854

Query: 864  SEKRTILEQN-IQFYKNNVEKNFEILKNKKERY------EDLTKDLRELTEKKEAFEKEL 916
             +   I +   I+ Y         + + +K  Y      +++ K +R ++++KE  +  +
Sbjct: 855  LDNNEIKDDELIELYTEKEAIETGVTEAEKNYYASRGDIDEMEKGIRAISKQKEGIDTII 914

Query: 917  EILNGEKRRVYGRINQNESQINSLSIDKAKYETRLEEEDRKL---YVCENIEQISEDITS 973
              L      +  +++  + +   LS++       L EED ++   Y  ++ EQI E++ S
Sbjct: 915  MELQNALNEIKLKLSSMKER---LSVEFEIDLDALMEEDPEVDEAYQEKSTEQIREEV-S 970

Query: 974  KIKEFDVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYL 1033
            K K+                ++K+ P+N  A++ Y  I +R+  +  ++ D    +   +
Sbjct: 971  KAKQ---------------KLEKIGPINPMAMEAYDEIKERHVFITSQKEDLTKAKNSLM 1015

Query: 1034 HLIEEVSKRKKEVFMDVYLKVAENYEKIYTEIGGSGK---LSLENPEDPFSGGLLIDASP 1090
              I+E+    KE F++ + ++  N+ K++  +  +     L L +P++P    + I A P
Sbjct: 1016 DTIKEIDTVAKETFLEAFEQIKTNFIKVFRSLFTAEDDCDLKLTDPDNPLESTIEIMAKP 1075

Query: 1091 MNKKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNA 1150
              K+  +++ +SGGEK+LTA + LF+I  L PAPF + DEVDA LD  N     ++I+  
Sbjct: 1076 KGKRPLTINQLSGGEKTLTATSLLFSIYLLKPAPFCIFDEVDAPLDDANIDKFNQIIQKF 1135

Query: 1151 SKDSQFIVISHREQMISKSDVMYGVCM-ENGLSKLV 1185
            S +SQFI+++H ++ ++ +D++YG+ M E G+S++V
Sbjct: 1136 SHESQFIIVTHNKRTMASTDIIYGITMIEAGVSRVV 1171