Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1147 a.a., chromosome partition protein Smc from Caulobacter crescentus NA1000 Δfur

 Score =  119 bits (298), Expect = 1e-30
 Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 5/216 (2%)

Query: 979  DVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLHLIEE 1038
            D   +E+H   LE     + PVN+RA ++ Q    R + +  +R D      K    IEE
Sbjct: 923  DAAGVEAHLFALERERDAIGPVNLRAEEEAQEYAGRLETMRSERADLSGAVTKLRAGIEE 982

Query: 1039 VSKRKKEVFMDVYLKVAENYEKIYTEI--GGSGKLSLENPEDPFSGGLLIDASPMNKKLQ 1096
            ++   +E  +  +  +  N++ ++  +  GG  +L L   +DP   GL I A P  K++ 
Sbjct: 983  LNAEGRERLLAAFDVINANFQTLFQALFGGGQAELKLIESDDPLEAGLEIFACPPGKRMA 1042

Query: 1097 SLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASKDSQ- 1155
            S+ +MSGGE++LTA A +F +   NPAP  VLDEVDA LD  N      M+    + +Q 
Sbjct: 1043 SMSLMSGGEQALTASALIFGVFLANPAPICVLDEVDAPLDDANVDRYCNMLDEMRRRTQT 1102

Query: 1156 -FIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
             FI I+H    +S+ D ++GV M E G+S+LV + +
Sbjct: 1103 RFIAITHNPVTMSRMDRLFGVTMAERGVSQLVSVDL 1138



 Score =  114 bits (285), Expect = 5e-29
 Identities = 122/556 (21%), Positives = 230/556 (41%), Gaps = 58/556 (10%)

Query: 7   IHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQLI 65
           + +  FKSF + ++ +I  G T I+GPNG GKSN ++ + +V+G  SAK++RAG  + +I
Sbjct: 6   LRLSGFKSFVEPTEFRIEPGLTGIVGPNGCGKSNLLEALRWVMGANSAKAMRAGGMDDVI 65

Query: 66  TYHNGKR--ENFAEVTLIFDNKDRKMPV---DSDKVGISRKVKINGDNNYYLIWNEEKEV 120
              +G R   N A+VTL  DN DR  P    D   + + R++   G+ + Y I       
Sbjct: 66  FAGSGARPARNHADVTLTIDNADRTAPAQFNDDPILEVVRRID-RGEGSTYRI------- 117

Query: 121 KENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIID 180
             NG          ++V+  ++  +    S  A+   ++ QG + ++I   P  RR+I++
Sbjct: 118 --NG----------REVRARDVQLLFADASTGANSPALVRQGQISELIGAKPQNRRRILE 165

Query: 181 EISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240
           E +GV+    +  +A+  L  A   + +++    E++  L +L++E   AE + +L+ E+
Sbjct: 166 EAAGVSGLHTRRHEAELRLRAAETNLSRLEDVARELETALNRLRREARQAEKYKRLSSEI 225

Query: 241 KATKYILTSKKIEFLNGILEKTKEE-------IEALKEMKVCFLKEISEYDAKSNDIRNR 293
           +A +  +   +       LE+T  E       +E            I+E +A    +R  
Sbjct: 226 RAVQGAVLYARWTEARDHLERTTSEATAAARLVEETARASAAAQVAITEAEAAMPPLREE 285

Query: 294 ---LQNLINELNEKGNEEIMELHKSIKEME------VTVDNDKKSLNGALDDLKNVNSQS 344
               Q ++ +L  + +    E   +  E E        +D D+     A DD     +  
Sbjct: 286 ATIAQAILGQLAIQKDRAEREAEAAAAEFERLSNDLSRIDADRAREAQAKDD---AAAAL 342

Query: 345 EKKGQDLVETRQKIETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILK 404
            +   +L E R  +        +  A   A +      E   ++L ++V   E Q     
Sbjct: 343 ARIAPELEEVRALVAAAPERGPELAAVAKAAEEARAAAEAAVEQLAARVAAEEAQGRAAA 402

Query: 405 QQERKLSERINESQNELYNFKNEFNALENEINKKSFN-----------LAKNKETIETLQ 453
            +  +   R N +   L   + E  A+  E++  + +           LA  +  +E  +
Sbjct: 403 ARLSEAEARANRTNRALEQARAERAAVGPEVDPAAADARQRFANAEAALAAARAALEEAE 462

Query: 454 KELEEIRSEHEDTKSLYKELEDVAVELEYSKKKV--VTLLENKKEYQDRLDKSHADYIKE 511
               +   +    + L + +ED    L    + +  +T   +K  +   LD    D    
Sbjct: 463 TARVKAAEQEAQARQLARSVEDQLGRLRTEARGLAQLTAPRSKSGHAPALDSVSPDKGYG 522

Query: 512 NAKIKAMKDMEDFSLD 527
            A   A+ D  D +LD
Sbjct: 523 AALAAALGDDLDAALD 538



 Score = 31.2 bits (69), Expect = 5e-04
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 10/105 (9%)

Query: 291 RNRLQNLINELNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGAL-------DDLKNVNSQ 343
           R R   + + + E+   E  EL + +    V V  D   +   L       D +  VN +
Sbjct: 888 RQRFAEVASAIREQARMEPEELGRHVAGEAVAVPKDAAGVEAHLFALERERDAIGPVNLR 947

Query: 344 SEKKGQDLVETRQKIETIRTETLQKEAEINALKTEMENLETEKKK 388
           +E++ Q   E   ++ET+R+E       +  L+  +E L  E ++
Sbjct: 948 AEEEAQ---EYAGRLETMRSERADLSGAVTKLRAGIEELNAEGRE 989