Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1155 a.a., chromosome segregation protein from Agrobacterium fabrum C58

 Score =  216 bits (550), Expect = 9e-60
 Identities = 273/1250 (21%), Positives = 538/1250 (43%), Gaps = 173/1250 (13%)

Query: 5    SEIHMKNFKSF-KNSKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQ 63
            +++ +  FKSF + S+  I  G T ++GPNG GKSN ++ + +V+G+ S K++RA   + 
Sbjct: 4    NKLRVVGFKSFVEPSEFIIEPGLTGVVGPNGCGKSNLVEALRWVMGENSYKNMRASGMDD 63

Query: 64   LITYHNGKR--ENFAEVTLIFDNKDRKMPV---DSDKVGISRKVKINGDNNYYLIWNEEK 118
            +I   +G R   N AEV L  DN DR  P    D+D++ ++R+++               
Sbjct: 64   VIFSGSGNRPARNTAEVGLYLDNSDRTAPAAFNDADEIQVTRRIE--------------- 108

Query: 119  EVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKI 178
              +ENG +  +     K+ +  ++  +    S  A   +++ QG + ++I+  P  RR++
Sbjct: 109  --RENGSVYRING---KEARAKDVQLLFADASTGARSPSMVGQGRIGELINAKPQARRQL 163

Query: 179  IDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTE 238
            ++E +G++    +  +A+  L  A   +E+++    ++++ +E LK++   A     L+ 
Sbjct: 164  LEEAAGISGLHSRRHEAELRLRAAETNLERLEDVTAQLESQIESLKRQARQANRFKMLSA 223

Query: 239  ELKATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNLI 298
            +++A +  L   +                           E  E + ++    N+  N++
Sbjct: 224  DIRAREATLLHIR-------------------------WVEAKEAEGEAESALNQATNIV 258

Query: 299  NELNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQKI 358
             E             K+  +ME        SL   L +L+   ++       +    Q++
Sbjct: 259  AE-------------KAQGQMEAAKQQGIASLK--LPELREDEAR-------VAAALQRL 296

Query: 359  ETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERINESQ 418
            +  RT   Q + E N L    + L     +  S++ E   + E L     ++  R++E +
Sbjct: 297  QIART---QLDDEANRLLRRRDELA----RRLSQLGEDIVREERLVADNAQILARLDEEE 349

Query: 419  NELYNFKNEFNALENEINKK----SFNLAKNKETIETLQKELEEIRSEHEDTKSLYKELE 474
             EL +  ++     +E+ +     +  LA+++    ++  E  E  +  +  +   ++L 
Sbjct: 350  AELLDILSDSGRHADEMREAFEAAAVKLAESEAVFTSITAERAEAAAGRQQLERAIRDLS 409

Query: 475  DVAVELEYSKKK----VVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDMEDFSLDRAV 530
            D  + LE   ++    + T+ E      D  ++  A    E A   A+   E+     A 
Sbjct: 410  DRKLRLERQSQEASAEIDTIDEKLSGLPDPAERREAVEAAEIAVEDALIVAEEAEAAVAE 469

Query: 531  KSVLEAKLPGVVDIAGN-LGKTDAEYKTAIE----NAGGNRLNYIVVKRMDDGARAIQYL 585
                EA   G ++ A N L   D E +T  +    +A  N     V + M    R  +  
Sbjct: 470  ARSAEALARGPLETAKNRLNALDTEARTITKMLATSAAANGSFTPVAEEMTV-ERGYEAA 528

Query: 586  KKNNLGRTTFLPLDRIN----GPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTII 641
                LG     PLD       G      DD G+   A  L+++    + L R       +
Sbjct: 529  LGAALGDDLESPLDASAPAYWGGNGNGADDPGLPQGAKPLLDYAQAPDAL-RRALAQIGV 587

Query: 642  VENLDYAKTLSKDHRA--RFVTLEGEVIEPSGAMIGGRSRKKSVIKVDIDTSKLEKLAED 699
            V ++  A+ L    +A  R VT EG +    G +    +   + +++    S+  +LAE 
Sbjct: 588  VADVSEARRLLPSLKAGQRLVTREGALFRWDGHIASADAPGAAALRL----SQKNRLAEI 643

Query: 700  ISELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIKEL 759
             +ELD   S  ++  ++L  K  T   R  EL  RL  ++D                   
Sbjct: 644  EAELDEARSILEEAEDQLAAK--TEDIRSSEL--RLSEVRDRSR---------------- 683

Query: 760  ELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFENSEHSKRIKV 819
             L +R+L E  + L  +    ER   +  ++    +  +++I  +I      E + RI++
Sbjct: 684  -LATRQLAEAREALTSA----ERASGDLLRRRDVVSEAQNQIGAQIDEIAVQEENARIEM 738

Query: 820  IDE-NIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNSNIKELSEKRTILEQNIQFYK 878
             D  ++   + +  E + E+  D  L+ E    +   ++   +    +   + Q    + 
Sbjct: 739  EDAPDLSVLDLRLRESQLEVATDRGLLAEARA-RHEGVSREAESRQRRIQAIGQERSTWA 797

Query: 879  NNVEKNFEILKNKKERYEDLTKDLRELTEKKEAFEK-------ELEILNGEKRRVYGRIN 931
            +      + +   +ER E+  +++ EL    E F++       EL+     +R    R+ 
Sbjct: 798  SRAASAADHIATLREREEEAREEIAELDIAPEEFDEKRRNLLNELQKTEDARRAAADRLA 857

Query: 932  QNES-----------QINSLSIDKAKY-----------ETRLEEEDRKLYVCENIEQISE 969
            + E+            ++ L+  + K            E RLE E R          ++ 
Sbjct: 858  EAENLQRAADRVAATALSELAEAREKRGRAEERLVSAREKRLETEHRIRETLNTEPHMAF 917

Query: 970  DITSKIKEF---DVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYE 1026
             +T    +    D+  +E     L+   ++L  VN+RA ++   +  + + L ++R D  
Sbjct: 918  RLTGLGPDQPKPDIRDVERDLDRLKIERERLGAVNLRAEEEQAELSGKLEALIKERDDII 977

Query: 1027 NEEKKYLHLIEEVSKRKKEVFMDVYLKVAENYEKIYTEI--GGSGKLSLENPEDPFSGGL 1084
            +  +K    I+ +++  +E  +  +  V   +++++T +  GG+ +L L   +DP   GL
Sbjct: 978  DAVRKLRAGIQSLNREGRERLIAAFDVVNSQFQRLFTHLFGGGTAELQLIESDDPLEAGL 1037

Query: 1085 LIDASPMNKKLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKN----A 1140
             I A P  KK Q++ ++SGGE++LTA+A +FA+   NPAP  VLDEVDA LD  N     
Sbjct: 1038 EILARPPGKKPQTMTLLSGGEQALTAMALIFAVFLTNPAPICVLDEVDAPLDDHNVERYC 1097

Query: 1141 GLIGEMIKNASKDSQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
             L+ EM+  AS +++F++I+H    +++ + ++GV M E G+S+LV + +
Sbjct: 1098 NLMDEMV--ASTETRFVIITHNPITMARMNRLFGVTMAEQGVSQLVSVDL 1145