Pairwise Alignments

Query, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

Subject, 1149 a.a., Chromosome partition protein Smc from Acinetobacter radioresistens SK82

 Score =  259 bits (663), Expect = 7e-73
 Identities = 262/1230 (21%), Positives = 555/1230 (45%), Gaps = 139/1230 (11%)

Query: 4    LSEIHMKNFKSFKNSK-LKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFN 62
            LS + +  FKSF +S  L   D  +A++GPNG GKSN ID I +V+G++SA+ LR G   
Sbjct: 3    LSSLKLSGFKSFADSTTLNFRDSRSAVVGPNGCGKSNVIDAIRWVMGESSARQLRGGSMQ 62

Query: 63   QLITYHNGKRE--NFAEVTLIFDNKDRKMPVDSD---KVGISRKVKINGDNNYYLIWNEE 117
             +I     KR+    A V L FDN   K+    +   ++ + R+V   G + Y+L     
Sbjct: 63   DVIFTGTAKRKPVGMASVELRFDNTYGKLGGAYNAYNELAVRRQVNREGKSEYFL----- 117

Query: 118  KEVKENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRK 177
                 NG           + ++ +I D+     L    + II QG + +++D  P+E R 
Sbjct: 118  -----NGT----------RCRRRDITDIFLGTGLGPRSYAIIEQGMINRLVDAKPDEMRV 162

Query: 178  IIDEISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLT 237
             I+E +G++ +  +  +    LE   + + +++    E+K+ L+ LKK+ E A  + +L 
Sbjct: 163  FIEEAAGISRYQARRRETLLHLEHTTQNLSRLEDIALELKSQLKSLKKQAETAVQYKELE 222

Query: 238  EELKATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNL 297
              ++  K              +E    + E  + ++  +  +++E       +R+ L  L
Sbjct: 223  NRIRTLK--------------IEILSVQCERSQHLQQEYTLQMNELGESFKLVRSELHTL 268

Query: 298  INELNEKGNEEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQK 357
             + L         EL + + +    + ++ +     + +LK    Q +   Q       +
Sbjct: 269  EHNLTSTS-----ELFQRLLQQSAPLQSEWQQAEKKMAELKMTLEQKQSLFQQNTTMLNQ 323

Query: 358  IETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQ-------TEILKQQERKL 410
            +E  + +T ++   +  ++ ++ENL  ++++L  + ++ E Q        ++LK Q++++
Sbjct: 324  LEQQKVQTKER---LKLIELQLENLYQQQEQLDEQTQQQEQQHQGRTQDIQLLKAQQQQV 380

Query: 411  SERINESQNEL---YNFKNEFNALENEINKKSFNLAKNKETIETL------QKELEEIRS 461
             ++  + + ++      K +  A   ++ K    + + +ET+ T       Q E +E+  
Sbjct: 381  GQQFEQLKQQVEKQQQQKMQMLAQTEQLLKNIGRIEQQRETLHTQIAQLQQQYESDELEQ 440

Query: 462  EHEDTKSLYKELEDVAVELEYSKKKVVTLLENKKEYQDRLDKSHADYIKENAKIKAMKDM 521
             H + + L +++E + +++   K+K++ L     +   +L +     +K + +I   +  
Sbjct: 441  RHTEKQQLQQQIEVLELQINTRKQKIIGLESVYTQKSSKLGE-----LKSSIQILYSEQK 495

Query: 522  EDFSLDRAVKSVLEAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARA 581
                L      V++     +V I   L K    Y + IE      L   V++     +  
Sbjct: 496  NLKQLMTQYGPVIQKDQVQLVQIL-KLNKQAKPYASLIEKFLSKWLTAHVLETGQSFSEN 554

Query: 582  IQYLKKNNLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTII 641
            I    K +               E + LD    +   I+       H +L+  V   T +
Sbjct: 555  ISRQLKGH-------------SDELIQLDHLPCLANWIET-----PHYSLWTQVAVATTL 596

Query: 642  VENLDYAKTLSKDHRARFV-TLEGEVIEPSGAMIGGRSRKKSVIKVDIDTSKLEKLAED- 699
             E L Y K   K H  + + TL+G  +    A+          +  D D+   + +    
Sbjct: 597  SEAL-YLK--DKLHTGQSILTLDGYHVGADWAI---------ALYYDDDSQAGQGMLSHR 644

Query: 700  --ISELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIK 757
              + E++  L ++ +++E+ + +  T   +    + + ++  DL  +++ +L       +
Sbjct: 645  IRLEEIEALLMQSGEQLEQQEAQLLTVKQQVQTEQHQQQLQLDLLKQQQTVL-------Q 697

Query: 758  ELELESRKLEEELDYLEGSKEELERKIEEFTKKISGFTSQRDRISEEIASFENSEHSKRI 817
            +L++   K++     L+  +++L  ++++F  ++     Q+D +  ++       H+  +
Sbjct: 698  QLDISIAKIQSTAQALKLQQQQLHIQLQQFDLQLQEDAMQKDDLEIDL-------HALDL 750

Query: 818  KVIDENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELN---SNIKELSEKRTILEQNI 874
            K +++ +  ++ ++ +FE E+      +++ L     EL+       +  ++  +LE++ 
Sbjct: 751  K-LEQILPNYKAQQFQFE-ELTEQLESMQQNLQHAQQELDLIRRQAMQTKQQIELLEKDA 808

Query: 875  QFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEAFEKELEILNGEKRRVYGRINQNE 934
             F K   ++    ++  K+  + +  +L  L  +    ++  E L     +    +NQ +
Sbjct: 809  SFLKVQYQQIITQIEQSKKFVDPIQLELPNLESQFSQQQQLTENLEKSWHKWQVELNQVQ 868

Query: 935  SQINSLSIDKAKYETRLE----EEDRKLYVCENIEQISEDITSKIKEFDVDALESHQIDL 990
             +   L+  + +++ + E    E + K    +  +      T ++KE + + +   +IDL
Sbjct: 869  EKQQQLTEQRYRFQQQDESLRTELEEKRLAWQAAKSDFLHYTEQLKELNSEPVLGLKIDL 928

Query: 991  EGHIKKLEP----------VNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLHLIEEVS 1040
             GH ++LE           VN+ A  +Y  +  R++EL  +  D EN  ++  + ++ + 
Sbjct: 929  SGHQQQLEKIQQKFEKIGAVNLAASQEYDEVSQRFEELSHQMRDLENTVEQLKNAMKSID 988

Query: 1041 KRKKEVFMDVYLKVAENYEKIYTEIGGSGKLSLENPEDPFSGGLLIDASPMNKKLQSLDV 1100
            +  +++FM  + +V    + ++ ++   G+ SL + ED +  G+ + A P  K+  SL +
Sbjct: 989  QETRKLFMSTFDQVNAELQVLFPKVFNGGEASL-SLEDDWQSGIKLMARPPGKRNSSLAL 1047

Query: 1101 MSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASKDSQFIVIS 1160
            +SGGEK+LTALA +FAI  LNPAPF VLDEVDA LD  N      ++K  S+  QFI I+
Sbjct: 1048 LSGGEKALTALALVFAIFRLNPAPFCVLDEVDAPLDDANVQRFCNLVKELSEQVQFIYIT 1107

Query: 1161 HREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189
            H +  ++ +  + GV M E G SKLV + +
Sbjct: 1108 HNKIAMTMATDLLGVTMPEPGTSKLVTVNL 1137