Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 461 a.a., RNA helicase from Pseudomonas simiae WCS417

 Score = 45.1 bits (105), Expect = 8e-09
 Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 15/159 (9%)

Query: 309 AKEITNDPRFIQAVKNLNELDIEHPKYE----KMLEIVKEILKENE--KIVIFAQYRDTV 362
           A +    P+ ++A    ++  IE   YE    + ++ V ++L        V F   +  V
Sbjct: 198 ASKFMRAPQQVKAEAFHSDDQIEQRFYEISPEERMDAVTKVLAHFRPASCVAFCFTKQQV 257

Query: 363 QKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKFKNEA-NVLVSTSVSEEGIDI 421
           Q+ VD L+   I A+   G        + Q+++ + +  F N + +VLV+T V+  G+DI
Sbjct: 258 QETVDHLTSKGISAVGLHGD-------LEQRDRDQVLAMFANRSTSVLVATDVAARGLDI 310

Query: 422 SSVNYVLFYEPVPSEIRMIQRRGRAAR-GEGGQVIVLIA 459
            S++ V+  E        I R GR  R GE G  I L+A
Sbjct: 311 DSLDMVINVELARDSEIHIHRVGRTGRAGETGIAISLVA 349