Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 578 a.a., ATP-dependent RNA helicase Atu4171 from Sphingobium sp. HT1-2

 Score = 45.4 bits (106), Expect = 8e-09
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 18/166 (10%)

Query: 348 ENEKIVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKFKNE-A 406
           E E  ++F   RD V+ +   L+E    A+   G+        SQ E+  A++  +++ A
Sbjct: 242 EAETAILFCATRDNVRHLHSSLTERGFAAVALSGEH-------SQNERNHALQALRDKRA 294

Query: 407 NVLVSTSVSEEGIDISSVNYVLFYEPVPSEIRMIQRR----GRAARGEGGQVIVLIAQKT 462
            V V+T V+  GID+ S+  V+  E +P +   +Q R    GRA +     +IV   ++ 
Sbjct: 295 RVCVATDVAARGIDLPSLTLVVHVE-LPRDAETMQHRSGRTGRAGKKGTAVLIVPYPRRR 353

Query: 463 RDEGYYRAG-----LAKEKNMKNILKNMQATLNKKLKELNEENEEE 503
           R E   R            + + IL+   A L   L E  E +E +
Sbjct: 354 RVESMLRGAKIPVEWGTPPSKEAILEQDNARLRSTLMEKAELDEAD 399