Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 440 a.a., ATP-dependent DEAD-box RNA helicase require for 50S ribosomal subunit biogenesis from Pseudomonas putida KT2440

 Score = 60.1 bits (144), Expect = 2e-13
 Identities = 70/306 (22%), Positives = 131/306 (42%), Gaps = 38/306 (12%)

Query: 243 SITVNKSELLGLNKKIMAMDDNIKYEMLRISSEAVKLEHAIEMLETQGKSTFLNYYQKLL 302
           ++ ++  ++L L++    +D     +M R+  E    E  +    T G +   +   K+L
Sbjct: 140 NLDLSHVQVLILDEADRMLDMGFAEDMERLCKECENREQTLLFSATTGGAALRDIIGKVL 199

Query: 303 TQNTKSAKEITNDPR--FIQAVKNLNE------LDIEHPKYEKMLEIVKEILKENE---K 351
                       DP    + +V  L E      +  +H +++   E + + L  NE   K
Sbjct: 200 -----------KDPEHLMLNSVSQLAEGTRQQIITADHDQHK---EQIAQWLLANETFDK 245

Query: 352 IVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAKAIEKFKN-EANVLV 410
            +IF   R    +I   L   +++A +  G+ +       QK++  AIE+FK   + VLV
Sbjct: 246 AIIFTNTRAMADRIYGHLVAKDVKAFVLHGEKD-------QKDRKLAIERFKQGSSKVLV 298

Query: 411 STSVSEEGIDISSVNYVLFYEPVPSEIRMIQRRGRAARGEG-GQVIVLIAQKTRDEGYYR 469
           +T V+  G+DI  ++ V+ ++   S    + R GR  R  G G  I LI     +     
Sbjct: 299 ATDVAARGLDIDGLDLVINFDMPRSGDEYVHRVGRTGRAGGEGLAISLITHNDWNLMSSI 358

Query: 470 AGLAKEKNMKNILKNMQATLN--KKLKELNEENEEESEKTENKDHYMDLRSVVSSKTSDK 527
               K++  + ++K ++ T N  KK+K   +    + +K E K    D ++    K + K
Sbjct: 359 ERYLKQQFERRVIKEVKGTYNGPKKVKASGKAAGSKKKKVEKKTG--DKKAAAKRKPTAK 416

Query: 528 LEENKP 533
            + N P
Sbjct: 417 PKANAP 422