Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 538 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

 Score = 52.8 bits (125), Expect = 5e-11
 Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 24/219 (10%)

Query: 340 EIVKEILKENEKI--VIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKGMSQKEQAK 397
           E++  I+   ++   +IF + +  V ++ + L+E    A    G        M+Q ++ K
Sbjct: 230 ELLSRIIDTEKEFYGLIFCKTKADVDEVANRLNEKGYAAEGLHGD-------MTQAQREK 282

Query: 398 AIEKFKNEA-NVLVSTSVSEEGIDISSVNYVLFYEPVPSEIRMIQRRGRAAR-GEGGQVI 455
            ++KFK +  NVLV+T V+  GIDI+ + +V+ ++   +    + R GR  R G+ G  I
Sbjct: 283 TLDKFKGKKINVLVATDVAARGIDINDLTHVVNFDIPQNPESYVHRIGRTGRAGKQGYAI 342

Query: 456 VLIAQKTRDEGYYRAGLAKEK-------NMKNILKNMQATLNKKLKELNEE------NEE 502
             +      +  Y   +AK +       ++K+I+   +  +   +KE+ E        + 
Sbjct: 343 TFVEPSEFRKFKYIQKIAKTEIKREEVPDVKDIISAKKIKIISGIKEVLESGKYADCEKM 402

Query: 503 ESEKTENKDHYMDLRSVVSSKTSDKLEENKPTKLDKKSK 541
            S+  E+ D    L +V+     D+L E+   K+ + S+
Sbjct: 403 ASDLLEDADPQEVLSAVLKYALKDELSESNYKKIGRGSQ 441



 Score = 33.1 bits (74), Expect = 4e-05
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 37  TGLGKTAIAALTIAGILSK--RNGKVLIIAPSRPLVDQHFKSMNQFLNIDSEKIV-ILNG 93
           TG GKTA   + I   + +  RN + LI+AP+R L  Q  + ++         +  +  G
Sbjct: 49  TGTGKTAAFGIPILETIDEHSRNTQALILAPTRELAIQVAEEIDSIKGSKRLNVFPVYGG 108

Query: 94  KISPKKREAMWESGKIFIATPQVAENDIISKILKPSQFSLLIADEA 139
           +   ++   +    +I + TP    + I  + +K    S ++ DEA
Sbjct: 109 QSIDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEA 154