Pairwise Alignments

Query, 752 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis S2

Subject, 457 a.a., ATP-dependent RNA helicase, specific for 23S rRNA (NCBI) from Escherichia coli BW25113

 Score = 43.1 bits (100), Expect = 3e-08
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 11/117 (9%)

Query: 346 LKENEKIVIFAQYRDTVQKIVDLLSENEIEAIMFVGQSNKDGKG-MSQKEQAKAIEKFKN 404
           L +    V+F   +   Q + D L+E        VGQS     G + Q+++ + + +F N
Sbjct: 238 LHQPSSCVVFCNTKKDCQAVCDALNE--------VGQSALSLHGDLEQRDRDQTLVRFAN 289

Query: 405 -EANVLVSTSVSEEGIDISSVNYVLFYEPVPSEIRMIQRRGRAAR-GEGGQVIVLIA 459
             A VLV+T V+  G+DI S+  V+ +E        + R GR AR G  G  I   A
Sbjct: 290 GSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCA 346